RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 TMEM121BQ9BXQ6 578 aaPredicted RBP6.63□□□□□ -1.35
VRK3-220ENST00000600259 CCSER1Q9C0I3 900 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 SMG9Q9H0W8 520 aaKnown RBP6.63□□□□□ -1.35
VRK3-220ENST00000600259 DUSP15Q9H1R2 295 aaPredicted RBP6.63□□□□□ -1.35
VRK3-220ENST00000600259 ANKFY1Q9P2R3 1169 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 KCNG1Q9UIX4 513 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 CPSF3Q9UKF6 684 aaKnown RBP6.63□□□□□ -1.35
VRK3-220ENST00000600259 RALYQ9UKM9 306 aaKnown RBP6.63□□□□□ -1.35
VRK3-220ENST00000600259 ANGPTL2Q9UKU9 493 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 TBX20Q9UMR3 447 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 CCL26Q9Y258 94 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 PCDHGA5Q9Y5G8 931 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.63□□□□□ -1.35
VRK3-220ENST00000600259 AKAP13Q12802 2813 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 BAHCC1Q9P281 2608 aa6.63□□□□□ -1.35
VRK3-220ENST00000600259 ANTXRLA6NF34 631 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 SOBPA7XYQ1 873 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 ANKRD63C9JTQ0 380 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 LAD1O00515 517 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 DPYSL4O14531 572 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 DCLK1O15075 740 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 RPP40O75818 363 aaKnown RBP6.62□□□□□ -1.35
VRK3-220ENST00000600259 EGFP01133 1207 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 PROS1P07225 676 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 NFICP08651 508 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 PLA2G4BP0C869 781 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 ARSAP15289 507 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 SMTNP53814 917 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 NLRP12P59046 1061 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 ATP2C1P98194 919 aaPredicted RBP6.62□□□□□ -1.35
VRK3-220ENST00000600259 AASDHQ4L235 1098 aaPredicted RBP6.62□□□□□ -1.35
VRK3-220ENST00000600259 SLC39A12Q504Y0 691 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 WSCD1Q658N2 575 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 SCARA3Q6AZY7 606 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 TRIM68Q6AZZ1 485 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 IL31Q6EBC2 164 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 ARMCX5Q6P1M9 558 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 CRELD2Q6UXH1 353 aaPredicted RBP6.62□□□□□ -1.35
VRK3-220ENST00000600259 DTHD1Q6ZMT9 781 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 ITIH5Q86UX2 942 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 MON1AQ86VX9 555 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 CD302Q8IX05 232 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 CAMKK1Q8N5S9 505 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 GIPC2Q8TF65 315 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 PLIN2Q99541 437 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 RAB34Q9BZG1 259 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 RPF1Q9H9Y2 349 aaKnown RBP6.62□□□□□ -1.35
VRK3-220ENST00000600259 BLOC1S4Q9NUP1 217 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 TMLHEQ9NVH6 421 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 KCND2Q9NZV8 630 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 EBF1Q9UH73 591 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 NOL7Q9UMY1 257 aaKnown RBP6.62□□□□□ -1.35
VRK3-220ENST00000600259 STYXL1Q9Y6J8 313 aa6.62□□□□□ -1.35
VRK3-220ENST00000600259 FASNP49327 2511 aaKnown RBP6.61□□□□□ -1.35
VRK3-220ENST00000600259 SPEGQ15772 3267 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 CITO14578 2027 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 BCLAF3A2AJT9 711 aaKnown RBP6.61□□□□□ -1.35
VRK3-220ENST00000600259 TISP43B9A030 160 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 CYB561D2O14569 222 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 CDX4O14627 284 aaPredicted RBP6.61□□□□□ -1.35
VRK3-220ENST00000600259 GIPC1O14908 333 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 XPOTO43592 962 aaKnown RBP6.61□□□□□ -1.35
VRK3-220ENST00000600259 ATG13O75143 517 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 RNF40O75150 1001 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 TADA3O75528 432 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 CHRM1P11229 460 aaPredicted RBP6.61□□□□□ -1.35
VRK3-220ENST00000600259 ODC1P11926 461 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 CDC25CP30307 473 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 NMT1P30419 496 aaKnown RBP6.61□□□□□ -1.35
VRK3-220ENST00000600259 GJA4P35212 333 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 MPLP40238 635 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 GPR15P49685 360 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 WNT7BP56706 349 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 HMGN5P82970 282 aaKnown RBP6.61□□□□□ -1.35
VRK3-220ENST00000600259 GTF2BQ00403 316 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 POU5F1Q01860 360 aaKnown RBP6.61□□□□□ -1.35
VRK3-220ENST00000600259 PPP2R3AQ06190 1150 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 GRSF1Q12849 480 aaKnown RBP eCLIP6.61□□□□□ -1.35
VRK3-220ENST00000600259 ZNF268Q14587 947 aaPredicted RBP6.61□□□□□ -1.35
VRK3-220ENST00000600259 PTPAQ15257 358 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 KYAT1Q16773 422 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 GAB4Q2WGN9 574 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 MGAT5BQ3V5L5 792 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 ARHGAP15Q53QZ3 475 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 TXNDC8Q6A555 127 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 TCEAL6Q6IPX3 200 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 SYT13Q7L8C5 426 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 EFCAB13Q8IY85 973 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 MAB21L3Q8N8X9 362 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 KDF1Q8NAX2 398 aaPredicted RBP6.61□□□□□ -1.35
VRK3-220ENST00000600259 CXorf38Q8TB03 319 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 FAM200AQ8TCP9 573 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 SPPL2BQ8TCT7 592 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 C2orf15Q8WU43 125 aaKnown RBP6.61□□□□□ -1.35
VRK3-220ENST00000600259 TCEAL3Q969E4 200 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 ZSCAN31Q96LW9 406 aaPredicted RBP6.61□□□□□ -1.35
VRK3-220ENST00000600259 SLC22A12Q96S37 553 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 PKMYT1Q99640 499 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 REEP2Q9BRK0 252 aa6.61□□□□□ -1.35
VRK3-220ENST00000600259 STRA6Q9BX79 667 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms