RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 PPP1R2P3Q6NXS1 205 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 C4orf50Q6ZRC1 276 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 CEP57Q86XR8 500 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 CNGA4Q8IV77 575 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 ZNF461Q8TAF7 563 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 SPPL2BQ8TCT7 592 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 RIN2Q8WYP3 895 aaPredicted RBP13.1□□□□□ -0.31
TGFB1-204ENST00000600196 RABGGTAQ92696 567 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 TMEM176AQ96HP8 235 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 KREMEN1Q96MU8 473 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 TCF25Q9BQ70 676 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 UBXN6Q9BZV1 441 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 CACNG4Q9UBN1 327 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 POLIQ9UNA4 740 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 F8W810 466 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 GRM6O15303 877 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 MED7O43513 233 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 LRRN2O75325 713 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 ABLIM3O94929 683 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 PAPLNO95428 1278 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 WEE2P0C1S8 567 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 PTPN1P18031 435 aaKnown RBP13.09□□□□□ -0.31
TGFB1-204ENST00000600196 SOX5P35711 763 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 MAGEA11P43364 429 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 NDST1P52848 882 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 LRMPQ12912 555 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 TBX2Q13207 712 aaPredicted RBP13.09□□□□□ -0.31
TGFB1-204ENST00000600196 CAMK1Q14012 370 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 CFAP221Q4G0U5 840 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 HABP4Q5JVS0 413 aaKnown RBP13.09□□□□□ -0.31
TGFB1-204ENST00000600196 ARHGAP17Q68EM7 881 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 RRAGAQ7L523 313 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 TAS1R1Q7RTX1 841 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 ARHGEF19Q8IW93 802 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 MYCBPAPQ8TBZ2 947 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 WHAMMQ8TF30 809 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 HASPINQ8TF76 798 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 ARNTL2Q8WYA1 636 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 FAM84AQ96KN4 292 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 PKMYT1Q99640 499 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 HNRNPABQ99729 332 aaKnown RBP13.09□□□□□ -0.31
TGFB1-204ENST00000600196 MRPL45Q9BRJ2 306 aaKnown RBP13.09□□□□□ -0.31
TGFB1-204ENST00000600196 PLEKHA4Q9H4M7 779 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 SMYD3Q9H7B4 428 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 ALG13Q9NP73 1137 aaKnown RBP13.09□□□□□ -0.31
TGFB1-204ENST00000600196 AFF4Q9UHB7 1163 aaKnown RBP13.09□□□□□ -0.31
TGFB1-204ENST00000600196 FHOD1Q9Y613 1164 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 ATP8B3O60423 1300 aa13.09□□□□□ -0.31
TGFB1-204ENST00000600196 NLRC5Q86WI3 1866 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 F8VZ95 297 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 FOXN3O00409 490 aaPredicted RBP13.08□□□□□ -0.32
TGFB1-204ENST00000600196 AP5Z1O43299 807 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 GFPT2O94808 682 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 CLSTN1O94985 981 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 ADCY5O95622 1261 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 POU2F2P09086 479 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 ATF2P15336 505 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 IGFBP6P24592 240 aaPredicted RBP13.08□□□□□ -0.32
TGFB1-204ENST00000600196 PRKCIP41743 596 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 TUFMP49411 452 aaKnown RBP13.08□□□□□ -0.32
TGFB1-204ENST00000600196 RAD23BP54727 409 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 ERVFC1P60507 584 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 CDK17Q00537 523 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 CNGA2Q16280 664 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 TSR1Q2NL82 804 aaKnown RBP13.08□□□□□ -0.32
TGFB1-204ENST00000600196 LILRA6Q6PI73 481 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 TMEM270Q6UE05 265 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 VSTM1Q6UX27 236 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 CYP26C1Q6V0L0 522 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 SLC4A11Q8NBS3 891 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 B3GALNT2Q8NCR0 500 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 OR8K1Q8NGG5 319 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 MICAL1Q8TDZ2 1067 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 BAP1Q92560 729 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 KLHL5Q96PQ7 755 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 RTP3Q9BQQ7 232 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 SYT15Q9BQS2 421 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 CLSTN3Q9BQT9 956 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 RHOBTB2Q9BYZ6 727 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 SDCBP2Q9H190 292 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 ENTPD7Q9NQZ7 604 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 PCDHB4Q9Y5E5 795 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 TRIOBPQ9H2D6 2365 aa13.08□□□□□ -0.32
TGFB1-204ENST00000600196 I3L4J1 428 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 TEX28O15482 410 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 LMO2P25791 158 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 CDH8P55286 799 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 SLC8A3P57103 927 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 GSDMDP57764 484 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 RAPGEF1Q13905 1077 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 SGO2Q562F6 1265 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 SFMBT2Q5VUG0 894 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 TMEM184AQ6ZMB5 413 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 TCEAL8Q8IYN2 117 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 RBBP8NLQ8NC74 664 aaPredicted RBP13.07□□□□□ -0.32
TGFB1-204ENST00000600196 STK32AQ8WU08 396 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 HEXIM2Q96MH2 286 aaKnown RBP13.07□□□□□ -0.32
TGFB1-204ENST00000600196 DNAJC7Q99615 494 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 ZNF518BQ9C0D4 1074 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms