RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, human

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH2D3A-208	ENST00000599563	SLC9A9	Q8IVB4	645 aa		13.78	□□□□□ -0.2
SH2D3A-208	ENST00000599563	THEM5	Q8N1Q8	247 aa		13.78	□□□□□ -0.2
SH2D3A-208	ENST00000599563	CSGALNACT2	Q8N6G5	542 aa		13.78	□□□□□ -0.2
SH2D3A-208	ENST00000599563	XXYLT1	Q8NBI6	393 aa		13.78	□□□□□ -0.2
SH2D3A-208	ENST00000599563	ENOX1	Q8TC92	643 aa	Known RBP	13.78	□□□□□ -0.2
SH2D3A-208	ENST00000599563	ZNF512	Q96ME7	567 aa	Predicted RBP	13.78	□□□□□ -0.2
SH2D3A-208	ENST00000599563	BPIFA3	Q9BQP9	254 aa		13.78	□□□□□ -0.2
SH2D3A-208	ENST00000599563	SAMSN1	Q9NSI8	373 aa	Known RBP	13.78	□□□□□ -0.2
SH2D3A-208	ENST00000599563	DNMT3B	Q9UBC3	853 aa	Known RBP	13.78	□□□□□ -0.2
SH2D3A-208	ENST00000599563	ITGA11	Q9UKX5	1188 aa		13.78	□□□□□ -0.2
SH2D3A-208	ENST00000599563	NFE2L3	Q9Y4A8	694 aa		13.78	□□□□□ -0.2
SH2D3A-208	ENST00000599563	ZNF233	A6NK53	670 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	CYB561D2	O14569	222 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	SEC24A	O95486	1093 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	EPHB3	P54753	998 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	NTHL1	P78549	312 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	TFAM	Q00059	246 aa	Known RBP	13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	FKBP3	Q00688	224 aa	Known RBP	13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	MYL5	Q02045	173 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	PTPRJ	Q12913	1337 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	ASTL	Q6HA08	431 aa	Predicted RBP	13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	FOXR2	Q6PJQ5	311 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	PDZD4	Q76G19	769 aa	Predicted RBP	13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	EFCAB13	Q8IY85	973 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	LRRC52	Q8N7C0	313 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	RNF214	Q8ND24	703 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	GOLGA5	Q8TBA6	731 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	SPATA18	Q8TC71	538 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	C2orf15	Q8WU43	125 aa	Known RBP	13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	CORO1B	Q9BR76	489 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	SLC2A4RG	Q9NR83	387 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	ASB3	Q9Y575	518 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	NUMBL	Q9Y6R0	609 aa		13.77	□□□□□ -0.21
SH2D3A-208	ENST00000599563	KPNA7	A9QM74	516 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	PPEF2	O14830	753 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	CETN3	O15182	167 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	FGF19	O95750	216 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	TMEM191B	P0C7N4	346 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	RFX1	P22670	979 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	ALDH1A3	P47895	512 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	PFKP	Q01813	784 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	SNRNP35	Q16560	246 aa	Known RBP	13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	RNF19B	Q6ZMZ0	732 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	NPAS3	Q8IXF0	933 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	FAM186B	Q8IYM0	893 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	ITFG1	Q8TB96	612 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	FAM200A	Q8TCP9	573 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	TMEM174	Q8WUU8	243 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	RSAD2	Q8WXG1	361 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	SHD	Q96IW2	340 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	ANKRD36BP1	Q96IX9	119 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	CNOT6L	Q96LI5	555 aa	Known RBP	13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	RTP3	Q9BQQ7	232 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	GPR88	Q9GZN0	384 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	RBSN	Q9H1K0	784 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	SMOC2	Q9H3U7	446 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	ASAH2	Q9NR71	780 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	FANCL	Q9NW38	375 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	HCFC1R1	Q9NWW0	138 aa		13.76	□□□□□ -0.21
SH2D3A-208	ENST00000599563	SPTLC1	O15269	473 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	ECI2	O75521	394 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	TNNC2	P02585	160 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	TRIM49	P0CI25	452 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	TRIM49C	P0CI26	452 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	RPL13	P26373	211 aa	Known RBP	13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	TUFM	P49411	452 aa	Known RBP	13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	EPHA5	P54756	1037 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	DLG4	P78352	724 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	RBP5	P82980	135 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	CYP24A1	Q07973	514 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	TWF1	Q12792	350 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	MYO1E	Q12965	1108 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	TPD52L1	Q16890	204 aa	Predicted RBP	13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	C1orf220	Q5T0J3	134 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	CDKAL1	Q5VV42	579 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	FILIP1	Q7Z7B0	1213 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	ITIH5	Q86UX2	942 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	DCP1B	Q8IZD4	617 aa	Known RBP	13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	SIX5	Q8N196	739 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	TMEM86A	Q8N2M4	240 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	BORCS6	Q96GS4	357 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	CEP63	Q96MT8	703 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	NAT10	Q9H0A0	1025 aa	Known RBP	13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	YIPF1	Q9Y548	306 aa		13.75	□□□□□ -0.21
SH2D3A-208	ENST00000599563	CACNA1H	O95180	2353 aa		13.74	□□□□□ -0.21
SH2D3A-208	ENST00000599563	MTMR11	A4FU01	709 aa		13.74	□□□□□ -0.21
SH2D3A-208	ENST00000599563	TULP1	O00294	542 aa	Predicted RBP	13.74	□□□□□ -0.21
SH2D3A-208	ENST00000599563	IKBKB	O14920	756 aa		13.74	□□□□□ -0.21
SH2D3A-208	ENST00000599563	NARS	O43776	548 aa	Known RBP	13.74	□□□□□ -0.21
SH2D3A-208	ENST00000599563	HUS1	O60921	280 aa		13.74	□□□□□ -0.21
SH2D3A-208	ENST00000599563	PDGFB	P01127	241 aa	Predicted RBP	13.74	□□□□□ -0.21
SH2D3A-208	ENST00000599563	ITGB3	P05106	788 aa		13.74	□□□□□ -0.21
SH2D3A-208	ENST00000599563	CFH	P08603	1231 aa		13.74	□□□□□ -0.21
SH2D3A-208	ENST00000599563	ATP1A3	P13637	1013 aa		13.74	□□□□□ -0.21
SH2D3A-208	ENST00000599563	AOC1	P19801	751 aa		13.74	□□□□□ -0.21
SH2D3A-208	ENST00000599563	POLR2B	P30876	1174 aa	Known RBP	13.74	□□□□□ -0.21
SH2D3A-208	ENST00000599563	VCP	P55072	806 aa	Known RBP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms