RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 MFSD10Q14728 455 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 GLRA4Q5JXX5 417 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 CEP85LQ5SZL2 805 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 C17orf99Q6UX52 265 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 CATSPER4Q7RTX7 472 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 CD302Q8IX05 232 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 JOSD2Q8TAC2 188 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 ZNF518BQ9C0D4 1074 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 VRTNQ9H8Y1 702 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 IP6K2Q9UHH9 426 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.32■□□□□ 0.04
VRK3-217ENST00000599538 NRCAMQ92823 1304 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 MBLAC1A4D2B0 266 aaPredicted RBP15.32■□□□□ 0.04
VRK3-217ENST00000599538 TP73O15350 636 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 PSTPIP1O43586 416 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 CYP3A5P20815 502 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 RFC1P35251 1148 aaPredicted RBP15.32■□□□□ 0.04
VRK3-217ENST00000599538 FNTAP49354 379 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 DRG2P55039 364 aaKnown RBP15.32■□□□□ 0.04
VRK3-217ENST00000599538 DCUN1D2Q6PH85 259 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 DPH6Q7L8W6 267 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 FAM76AQ8TAV0 307 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 LRRC45Q96CN5 670 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 TMEM176AQ96HP8 235 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 PLVAPQ9BX97 442 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 EPB41L4BQ9H329 900 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 NXF3Q9H4D5 531 aaKnown RBP15.32■□□□□ 0.04
VRK3-217ENST00000599538 RASAL2Q9UJF2 1139 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 C2CD2Q9Y426 696 aa15.32■□□□□ 0.04
VRK3-217ENST00000599538 MICAL2O94851 1124 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 ERBB2P04626 1255 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 PAEPP09466 180 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 KRT10P13645 584 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 CAPN2P17655 700 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 ATICP31939 592 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 NDST1P52848 882 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 YWHAEP62258 255 aaKnown RBP15.31■□□□□ 0.04
VRK3-217ENST00000599538 ZNF844Q08AG5 666 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 KATNAL2Q8IYT4 538 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 C3orf20Q8ND61 904 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 C18orf25Q96B23 403 aaPredicted RBP15.31■□□□□ 0.04
VRK3-217ENST00000599538 GCOM2Q9BZD3 368 aaPredicted RBP15.31■□□□□ 0.04
VRK3-217ENST00000599538 OSBPL8Q9BZF1 889 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 DCLK3Q9C098 648 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 LHX5Q9H2C1 402 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 TUBGCP4Q9UGJ1 667 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 PRDM4Q9UKN5 801 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 PODXLO00592 558 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 PPFIA2O75334 1257 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 MYL3P08590 195 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 DARSP14868 501 aaKnown RBP15.31■□□□□ 0.04
VRK3-217ENST00000599538 AKAP5P24588 427 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 MAN1A1P33908 653 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 KRT17Q04695 432 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 TRIP13Q15645 432 aaPredicted RBP15.31■□□□□ 0.04
VRK3-217ENST00000599538 PPP1R2P3Q6NXS1 205 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 SAPCD2Q86UD0 394 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 ARFGAP1Q8N6T3 406 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 EMC1Q8N766 993 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 C12orf29Q8N999 325 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 UBA3Q8TBC4 463 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 APOL6Q9BWW8 343 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 ITGA11Q9UKX5 1188 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 CEP83Q9Y592 693 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 NME7Q9Y5B8 376 aa15.31■□□□□ 0.04
VRK3-217ENST00000599538 SMIM35A0A1B0GVV1 85 aa15.3■□□□□ 0.04
VRK3-217ENST00000599538 HAS3O00219 553 aa15.3■□□□□ 0.04
VRK3-217ENST00000599538 PIK3R2O00459 728 aa15.3■□□□□ 0.04
VRK3-217ENST00000599538 ECEL1O95672 775 aa15.3■□□□□ 0.04
VRK3-217ENST00000599538 PSEN2P49810 448 aa15.3■□□□□ 0.04
VRK3-217ENST00000599538 RBP5P82980 135 aa15.3■□□□□ 0.04
VRK3-217ENST00000599538 KAZNQ674X7 775 aa15.3■□□□□ 0.04
VRK3-217ENST00000599538 TTC19Q6DKK2 380 aaPredicted RBP15.3■□□□□ 0.04
VRK3-217ENST00000599538 SLC27A1Q6PCB7 646 aa15.3■□□□□ 0.04
VRK3-217ENST00000599538 MFSD7Q6UXD7 560 aa15.3■□□□□ 0.04
VRK3-217ENST00000599538 PRUNE1Q86TP1 453 aa15.3■□□□□ 0.04
VRK3-217ENST00000599538 IFNL1Q8IU54 200 aa15.3■□□□□ 0.04
VRK3-217ENST00000599538 HEXIM2Q96MH2 286 aaKnown RBP15.3■□□□□ 0.04
VRK3-217ENST00000599538 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.3■□□□□ 0.04
VRK3-217ENST00000599538 TRPM7Q96QT4 1865 aa15.3■□□□□ 0.04
VRK3-217ENST00000599538 MYADML2A6NDP7 307 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 MANSC4A6NHS7 340 aaPredicted RBP15.29■□□□□ 0.04
VRK3-217ENST00000599538 GPD2P43304 727 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 PSMC1P62191 440 aaKnown RBP15.29■□□□□ 0.04
VRK3-217ENST00000599538 PPARDQ03181 441 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 PPP1R7Q15435 360 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 KYAT1Q16773 422 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 XYLT1Q86Y38 959 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 EXD1Q8NHP7 514 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 RAPGEF5Q92565 580 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 SNX27Q96L92 541 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 ZIC5Q96T25 663 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 ZMYND15Q9H091 742 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 CYP3A43Q9HB55 503 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 M0QYV0 167 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 MED7O43513 233 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 SHBGP04278 402 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 KRT3P12035 628 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 PSMC4P43686 418 aa15.29■□□□□ 0.04
VRK3-217ENST00000599538 INCA1Q0VD86 236 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms