RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 STAT6P42226 847 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 IRX4P78413 519 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 KLHL40Q2TBA0 621 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 SKOR2Q2VWA4 1001 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 ARHGAP29Q52LW3 1261 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 SLC8B1Q6J4K2 584 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 KRBA2Q6ZNG9 492 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 C3orf58Q8NDZ4 430 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 RAD54LQ92698 747 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 DHX58Q96C10 678 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 CDK5RAP3Q96JB5 506 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 LRRC3BQ96PB8 259 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 TMEM209Q96SK2 561 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 ANKEF1Q9NU02 776 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 KBTBD4Q9NVX7 518 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 GDAQ9Y2T3 454 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 PPME1Q9Y570 386 aa15.11■□□□□ 0.01
SHKBP1-218ENST00000598907 ATG13O75143 517 aa15.1■□□□□ 0.01
SHKBP1-218ENST00000598907 PRB1P04280 392 aa15.1■□□□□ 0.01
SHKBP1-218ENST00000598907 ZRSR1Q15695 479 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-218ENST00000598907 FSTL4Q6MZW2 842 aa15.1■□□□□ 0.01
SHKBP1-218ENST00000598907 IFNLR1Q8IU57 520 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-218ENST00000598907 ARID3BQ8IVW6 561 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-218ENST00000598907 CAMKK1Q8N5S9 505 aa15.1■□□□□ 0.01
SHKBP1-218ENST00000598907 TPSD1Q9BZJ3 242 aa15.1■□□□□ 0.01
SHKBP1-218ENST00000598907 MAGEF1Q9HAY2 307 aa15.1■□□□□ 0.01
SHKBP1-218ENST00000598907 DNM3Q9UQ16 869 aa15.1■□□□□ 0.01
SHKBP1-218ENST00000598907 ATG2BQ96BY7 2078 aa15.1■□□□□ 0.01
SHKBP1-218ENST00000598907 A0A087WWV3 80 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 LRRIQ4A6NIV6 560 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 TMEM189-UBE2V1I3L0A0 370 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 MEFVO15553 781 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 TRAPPC3O43617 180 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 TRAK2O60296 914 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 EGFP01133 1207 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 CAPNS1P04632 268 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 GLRA2P23416 452 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 DHPSP49366 369 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 DGKEP52429 567 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 EPHA5P54756 1037 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 SLC12A3P55017 1021 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 GRSF1Q12849 480 aaKnown RBP eCLIP15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 ITPRIPL2Q3MIP1 535 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 PMS2CLQ68D20 193 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 CD300LGQ6UXG3 332 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 OTUD6AQ7L8S5 288 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 SYT2Q8N9I0 419 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 LEMD2Q8NC56 503 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 GLIS3Q8NEA6 775 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 RASSF8Q8NHQ8 419 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 PIGOQ8TEQ8 1089 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 LARP4BQ92615 738 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 PIGKQ92643 395 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 PDZD7Q9H5P4 517 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 USP20Q9Y2K6 914 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 ASCC3Q8N3C0 2202 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 CACNA1EQ15878 2313 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 BPTFQ12830 3046 aa15.09■□□□□ 0.01
SHKBP1-218ENST00000598907 NUP210Q8TEM1 1887 aaPredicted RBP15.08■□□□□ 0.01
SHKBP1-218ENST00000598907 TTLL13PA6NNM8 815 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 PRAMEF12O95522 483 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 APBB3O95704 486 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 PLA2G4BP0C869 781 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 CPB1P15086 417 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 RARRES1P49788 294 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 MCM6Q14566 821 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 CNNM4Q6P4Q7 775 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 CEP57L1Q8IYX8 460 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 PAGE5Q96GU1 130 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 GPR88Q9GZN0 384 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 POLR3FQ9H1D9 316 aaPredicted RBP15.08■□□□□ 0
SHKBP1-218ENST00000598907 TNMDQ9H2S6 317 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 CLSTN2Q9H4D0 955 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 FBXL5Q9UKA1 691 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 RAXQ9Y2V3 346 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 YIPF1Q9Y548 306 aa15.08■□□□□ 0
SHKBP1-218ENST00000598907 BCKDHBP21953 392 aa15.07■□□□□ 0
SHKBP1-218ENST00000598907 FAM193AP78312 1265 aa15.07■□□□□ 0
SHKBP1-218ENST00000598907 CACNB1Q02641 598 aaPredicted RBP15.07■□□□□ 0
SHKBP1-218ENST00000598907 UPP1Q16831 310 aa15.07■□□□□ 0
SHKBP1-218ENST00000598907 CTXN3Q4LDR2 81 aa15.07■□□□□ 0
SHKBP1-218ENST00000598907 TRIM61Q5EBN2 209 aa15.07■□□□□ 0
SHKBP1-218ENST00000598907 TMEM196Q5HYL7 178 aa15.07■□□□□ 0
SHKBP1-218ENST00000598907 SV2BQ7L1I2 683 aa15.07■□□□□ 0
SHKBP1-218ENST00000598907 ARMCX6Q7L4S7 300 aa15.07■□□□□ 0
SHKBP1-218ENST00000598907 RPLP0P6Q8NHW5 317 aa15.07■□□□□ 0
SHKBP1-218ENST00000598907 MDM1Q8TC05 714 aa15.07■□□□□ 0
SHKBP1-218ENST00000598907 CCDC43Q96MW1 224 aaKnown RBP15.07■□□□□ 0
SHKBP1-218ENST00000598907 SMG9Q9H0W8 520 aaKnown RBP15.07■□□□□ 0
SHKBP1-218ENST00000598907 BHMT2Q9H2M3 363 aa15.07■□□□□ 0
SHKBP1-218ENST00000598907 CCDC86Q9H6F5 360 aaKnown RBP15.07■□□□□ 0
SHKBP1-218ENST00000598907 TMEM63CQ9P1W3 806 aa15.07■□□□□ 0
SHKBP1-218ENST00000598907 THADAQ6YHU6 1953 aa15.07■□□□□ 0
SHKBP1-218ENST00000598907 NAV2Q8IVL1 2488 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 H0Y626 953 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 H7C4K7 107 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 N4BP3O15049 544 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 TRIM16O95361 564 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 MYL1P05976 194 aa15.06■□□□□ 0
SHKBP1-218ENST00000598907 CYP11B2P19099 503 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms