RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 HNRNPA1P09651 372 aaKnown RBP eCLIP12.95□□□□□ -0.34
ZNF548-209ENST00000598895 TRIM49P0CI25 452 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 TRIM49CP0CI26 452 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
ZNF548-209ENST00000598895 PAX3P23760 479 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 PMS1P54277 932 aaKnown RBP12.95□□□□□ -0.34
ZNF548-209ENST00000598895 MYL6P60660 151 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 ADAM9Q13443 819 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 TRPC3Q13507 836 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 ZCWPW2Q504Y3 356 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 TDRD10Q5VZ19 366 aaKnown RBP12.95□□□□□ -0.34
ZNF548-209ENST00000598895 TPGS2Q68CL5 300 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 KLHL10Q6JEL2 608 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 C11orf57Q6ZUT1 292 aaPredicted RBP12.95□□□□□ -0.34
ZNF548-209ENST00000598895 OSTM1Q86WC4 334 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 FAM186BQ8IYM0 893 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 TTC9BQ8N6N2 239 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 MMS19Q96T76 1030 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 CRISPLD1Q9H336 500 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 WDR6Q9NNW5 1121 aaKnown RBP12.95□□□□□ -0.34
ZNF548-209ENST00000598895 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.95□□□□□ -0.34
ZNF548-209ENST00000598895 DDX43Q9NXZ2 648 aaKnown RBP12.95□□□□□ -0.34
ZNF548-209ENST00000598895 AFF4Q9UHB7 1163 aaKnown RBP12.95□□□□□ -0.34
ZNF548-209ENST00000598895 NR2E1Q9Y466 385 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 C5orf42Q9H799 3197 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 MTMR11A4FU01 709 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 N4BP1O75113 896 aaKnown RBP12.94□□□□□ -0.34
ZNF548-209ENST00000598895 XYLBO75191 536 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 ASGR2P07307 311 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 BMP6P22004 513 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 RPL13P26373 211 aaKnown RBP12.94□□□□□ -0.34
ZNF548-209ENST00000598895 VAMP7P51809 220 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 TWF1Q12792 350 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 DUSP4Q13115 394 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 GPR17Q13304 367 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 MYBPC2Q14324 1141 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 CCDC142Q17RM4 750 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 SOWAHAQ2M3V2 549 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 ANKRD40Q6AI12 368 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 LRRTM3Q86VH5 581 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 DHX40Q8IX18 779 aaKnown RBP12.94□□□□□ -0.34
ZNF548-209ENST00000598895 TCEAL8Q8IYN2 117 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 ADGRF2Q8IZF7 708 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 ADSSL1Q8N142 457 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 ATAD1Q8NBU5 361 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 ING5Q8WYH8 240 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 MYADMQ96S97 322 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 TSG101Q99816 390 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 GTPBP4Q9BZE4 634 aaKnown RBP12.94□□□□□ -0.34
ZNF548-209ENST00000598895 ZCWPW1Q9H0M4 648 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 GDAP2Q9NXN4 497 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 DNMT3BQ9UBC3 853 aaKnown RBP12.94□□□□□ -0.34
ZNF548-209ENST00000598895 NXF1Q9UBU9 619 aaKnown RBP12.94□□□□□ -0.34
ZNF548-209ENST00000598895 LIMD1Q9UGP4 676 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 YIPF1Q9Y548 306 aa12.94□□□□□ -0.34
ZNF548-209ENST00000598895 DOCK6Q96HP0 2047 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 FAM86C2PA6NEL3 165 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 VNN1O95497 513 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 C4BPAP04003 597 aaKnown RBP12.93□□□□□ -0.34
ZNF548-209ENST00000598895 KRT13P13646 458 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 FSHRP23945 695 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 HOXA9P31269 272 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 PSMC2P35998 433 aaKnown RBP12.93□□□□□ -0.34
ZNF548-209ENST00000598895 GCLMP48507 274 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 NLRP12P59046 1061 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 TNNC1P63316 161 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 LRMPQ12912 555 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 STIM1Q13586 685 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 MORC3Q14149 939 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 NFIL3Q16649 462 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 EDRF1Q3B7T1 1238 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 WDR72Q3MJ13 1102 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 C1orf220Q5T0J3 134 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 CENPPQ6IPU0 288 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 CYP26C1Q6V0L0 522 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 SCARA5Q6ZMJ2 495 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 ELOA2Q8IYF1 753 aaPredicted RBP12.93□□□□□ -0.34
ZNF548-209ENST00000598895 TMC2Q8TDI7 906 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 ACSF2Q96CM8 615 aaPredicted RBP12.93□□□□□ -0.34
ZNF548-209ENST00000598895 C16orf45Q96MC5 204 aaPredicted RBP12.93□□□□□ -0.34
ZNF548-209ENST00000598895 SEPT5Q99719 369 aaPredicted RBP12.93□□□□□ -0.34
ZNF548-209ENST00000598895 CORO1BQ9BR76 489 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 MRPL45Q9BRJ2 306 aaKnown RBP12.93□□□□□ -0.34
ZNF548-209ENST00000598895 OXCT2Q9BYC2 517 aaPredicted RBP12.93□□□□□ -0.34
ZNF548-209ENST00000598895 SMOC2Q9H3U7 446 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 TMLHEQ9NVH6 421 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 ABI2Q9NYB9 513 aaPredicted RBP12.93□□□□□ -0.34
ZNF548-209ENST00000598895 CTNND2Q9UQB3 1225 aa12.93□□□□□ -0.34
ZNF548-209ENST00000598895 VCANP13611 3396 aa12.92□□□□□ -0.34
ZNF548-209ENST00000598895 PSMA7O14818 248 aa12.92□□□□□ -0.34
ZNF548-209ENST00000598895 CETN3O15182 167 aa12.92□□□□□ -0.34
ZNF548-209ENST00000598895 CBFA2T2O43439 604 aa12.92□□□□□ -0.34
ZNF548-209ENST00000598895 DCXO43602 365 aa12.92□□□□□ -0.34
ZNF548-209ENST00000598895 ATP2C2O75185 946 aa12.92□□□□□ -0.34
ZNF548-209ENST00000598895 PDGFRBP09619 1106 aa12.92□□□□□ -0.34
ZNF548-209ENST00000598895 SKILP12757 684 aa12.92□□□□□ -0.34
ZNF548-209ENST00000598895 MYL4P12829 197 aa12.92□□□□□ -0.34
ZNF548-209ENST00000598895 PIK3CAP42336 1068 aa12.92□□□□□ -0.34
ZNF548-209ENST00000598895 RAP1GAPP47736 663 aa12.92□□□□□ -0.34
ZNF548-209ENST00000598895 STX17P56962 302 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms