RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 MRPL45Q9BRJ2 306 aaKnown RBP16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 SMYD3Q9H7B4 428 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 APOBEC3GQ9HC16 384 aaKnown RBP16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.14■□□□□ 0.171e-7■■■■■ 115.4
GTF2F1-206ENST00000598607 GCNT4Q9P109 453 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 AFF4Q9UHB7 1163 aaKnown RBP16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 CDH9Q9ULB4 789 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 REV3LO60673 3130 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 A8MXQ7 604 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 TBX10O75333 385 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 ZNF18P17022 549 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 IQCB1Q15051 598 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 KRT31Q15323 416 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 MAPRE1Q15691 268 aaKnown RBP16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 NFE2Q16621 373 aaPredicted RBP16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 EXOC3L4Q17RC7 722 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 UVSSAQ2YD98 709 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 INTS6LQ5JSJ4 861 aaKnown RBP16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 UNC93AQ86WB7 457 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 FAM200AQ8TCP9 573 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 ELMO3Q96BJ8 720 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 SYT15Q9BQS2 421 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 TSPY26PQ9H489 355 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 SFXN1Q9H9B4 322 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 CBX8Q9HC52 389 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 TAB2Q9NYJ8 693 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 THEGQ9P2T0 379 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 LIMA1Q9UHB6 759 aaKnown RBP16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 BARX2Q9UMQ3 279 aaPredicted RBP16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 GREB1Q4ZG55 1949 aa16.13■□□□□ 0.17
GTF2F1-206ENST00000598607 DENND4AQ7Z401 1863 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 GOLGA6L19H0YKK7 550 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 LRRN2O75325 713 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 OR4Q2P0C623 313 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 SPATA31D3P0C874 917 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 KCNA5P22460 613 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 ACAT1P24752 427 aaKnown RBP16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 LTBRP36941 435 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 RAP1GAPP47736 663 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 CDH8P55286 799 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 AAK1Q2M2I8 961 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 SLC39A12Q504Y0 691 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 MIIPQ5JXC2 388 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 RNF19BQ6ZMZ0 732 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 SPATA31D4Q6ZUB0 917 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 TCEAL8Q8IYN2 117 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 LMO3Q8TAP4 145 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 SPPL2BQ8TCT7 592 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 TATDN2Q93075 761 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 TNIP3Q96KP6 325 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 FAM81BQ96LP2 452 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 TMEM209Q96SK2 561 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 INTS2Q9H0H0 1204 aaKnown RBP16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 SDCBP2Q9H190 292 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 VPS16Q9H269 839 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 ZDHHC7Q9NXF8 308 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 CLEC1BQ9P126 229 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 HSFX1Q9UBD0 423 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 CD207Q9UJ71 328 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 DOCK6Q96HP0 2047 aa16.12■□□□□ 0.17
GTF2F1-206ENST00000598607 ZNF638Q14966 1978 aaKnown RBP16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 MTMR11A4FU01 709 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 PRRG1O14668 218 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 ZMYND10O75800 440 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 C8AP07357 584 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 PDGFRBP09619 1106 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 WEE2P0C1S8 567 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 LMO2P25791 158 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 COPB1P53618 953 aaKnown RBP16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 ZNF445P59923 1031 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 ITIH3Q06033 890 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 DLX2Q07687 328 aaPredicted RBP16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 ADCY1Q08828 1119 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 INCA1Q0VD86 236 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 LRMPQ12912 555 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 CUL2Q13617 745 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 PPM1LQ5SGD2 360 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 FKBP15Q5T1M5 1219 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 CYP26C1Q6V0L0 522 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 C4orf50Q6ZRC1 276 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 PPM1KQ8N3J5 372 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 CMASQ8NFW8 434 aaPredicted RBP16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 MSLNLQ96KJ4 702 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 HSD3B7Q9H2F3 369 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 CYP4F11Q9HBI6 524 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 PCDHB5Q9Y5E4 795 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 DENND4CQ5VZ89 1909 aa16.11■□□□□ 0.17
GTF2F1-206ENST00000598607 LRRC10BA6NIK2 292 aa16.1■□□□□ 0.17
GTF2F1-206ENST00000598607 LRG1P02750 347 aa16.1■□□□□ 0.17
GTF2F1-206ENST00000598607 HNRNPA1P09651 372 aaKnown RBP eCLIP16.1■□□□□ 0.17
GTF2F1-206ENST00000598607 HOXA9P31269 272 aa16.1■□□□□ 0.17
GTF2F1-206ENST00000598607 NDST1P52848 882 aa16.1■□□□□ 0.17
GTF2F1-206ENST00000598607 GCNT1Q02742 428 aa16.1■□□□□ 0.17
GTF2F1-206ENST00000598607 PLD1Q13393 1074 aa16.1■□□□□ 0.17
GTF2F1-206ENST00000598607 PUS10Q3MIT2 529 aaKnown RBP16.1■□□□□ 0.17
GTF2F1-206ENST00000598607 LEXMQ3ZCV2 418 aa16.1■□□□□ 0.17
GTF2F1-206ENST00000598607 CES5AQ6NT32 575 aa16.1■□□□□ 0.17
GTF2F1-206ENST00000598607 FAM171BQ6P995 826 aa16.1■□□□□ 0.17
GTF2F1-206ENST00000598607 TRIM65Q6PJ69 517 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms