RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 SNX3O60493 162 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 GHRP10912 638 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 ARSEP51690 589 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 FASTKD3Q14CZ7 662 aaKnown RBP20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 ZNF699Q32M78 642 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 EAPPQ56P03 285 aaPredicted RBP20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 HP1BP3Q5SSJ5 553 aaPredicted RBP20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 DENND1BQ6P3S1 775 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 DRICH1Q6PGQ1 229 aaPredicted RBP20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 GADL1Q6ZQY3 521 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 TAX1BP1Q86VP1 789 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 GDAP1Q8TB36 358 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 FGD4Q96M96 766 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 PTPRHQ9HD43 1115 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 CYTH4Q9UIA0 394 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 PCDHGC3Q9UN70 934 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 CDH16O75309 829 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 PROZP22891 400 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 EIF4BP23588 611 aaKnown RBP20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 CDKN2BP42772 138 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 RAP1GAPP47736 663 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 LMNB2Q03252 620 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 MXD4Q14582 209 aaPredicted RBP20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 OASLQ15646 514 aaKnown RBP20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 EEF1DP3Q658K8 133 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 TMEM192Q8IY95 271 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 SRRM1Q8IYB3 904 aaKnown RBP20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 FAM167AQ96KS9 214 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 SAYSD1Q9NPB0 183 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 KLC4Q9NSK0 619 aa20.7■□□□□ 0.9
GRAMD1A-207ENST00000598118 LRRD1A4D1F6 860 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 CNMDO75829 334 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 OAS1P00973 400 aaKnown RBP20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 GCAP28676 217 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 RFC1P35251 1148 aaPredicted RBP20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 PDE4CQ08493 712 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 PIGHQ14442 188 aaPredicted RBP20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 PTPN20Q4JDL3 420 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 TFDP3Q5H9I0 405 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 ZBTB8OSQ8IWT0 167 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 ARFGAP1Q8N6T3 406 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 ZNF518BQ9C0D4 1074 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 NXF1Q9UBU9 619 aaKnown RBP20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 PECAM1P16284 738 aaPredicted RBP20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 GPS1Q13098 491 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 STAT4Q14765 748 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 FUKQ8N0W3 1084 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 JOSD2Q8TAC2 188 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 CKAP2Q8WWK9 683 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 TCP11Q8WWU5 503 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 NLRP4Q96MN2 994 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 TMEM121Q9BTD3 319 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 ABCF3Q9NUQ8 709 aa20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.69■□□□□ 0.92e-7■■■□□ 15.8
GRAMD1A-207ENST00000598118 SAE1Q9UBE0 346 aaPredicted RBP20.69■□□□□ 0.9
GRAMD1A-207ENST00000598118 C3orf70A6NLC5 250 aaPredicted RBP20.68■□□□□ 0.9
GRAMD1A-207ENST00000598118 GOLGA8SH3BPF8 625 aa20.68■□□□□ 0.9
GRAMD1A-207ENST00000598118 IRF6O14896 467 aa20.68■□□□□ 0.9
GRAMD1A-207ENST00000598118 LGR5O75473 907 aa20.68■□□□□ 0.9
GRAMD1A-207ENST00000598118 ORC1Q13415 861 aa20.68■□□□□ 0.9
GRAMD1A-207ENST00000598118 MPZL3Q6UWV2 235 aa20.68■□□□□ 0.9
GRAMD1A-207ENST00000598118 TSHZ1Q6ZSZ6 1077 aa20.68■□□□□ 0.9
GRAMD1A-207ENST00000598118 KIAA0319LQ8IZA0 1049 aa20.68■□□□□ 0.9
GRAMD1A-207ENST00000598118 NIPA2Q8N8Q9 360 aa20.68■□□□□ 0.9
GRAMD1A-207ENST00000598118 NSRP1Q9H0G5 558 aaKnown RBP20.68■□□□□ 0.9
GRAMD1A-207ENST00000598118 MINDY3Q9H8M7 445 aa20.68■□□□□ 0.9
GRAMD1A-207ENST00000598118 DRG1Q9Y295 367 aaKnown RBP20.68■□□□□ 0.9
GRAMD1A-207ENST00000598118 VCPP55072 806 aaKnown RBP20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 COPS2P61201 443 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 SMTNL2Q2TAL5 461 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 CELF3Q5SZQ8 465 aaKnown RBP20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 ATF7IP2Q5U623 682 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 NUGGCQ68CJ6 796 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 TRPM8Q7Z2W7 1104 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 MAML1Q92585 1016 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 COPS5Q92905 334 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 GGT7Q9UJ14 662 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 TPX2Q9ULW0 747 aaKnown RBP20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 SLC12A4Q9UP95 1085 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 INO80B-WBP1J3KQ70 363 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 IQCF3P0C7M6 154 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 IL1R2P27930 398 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 PTPN7P35236 360 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 CDH8P55286 799 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 XRCC4Q13426 336 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 SURF1Q15526 300 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 CCDC142Q17RM4 750 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 FOXP3Q9BZS1 431 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 INO80BQ9C086 356 aaPredicted RBP20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 FZD8Q9H461 694 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 C10orf88Q9H8K7 445 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 TXNRD2Q9NNW7 524 aa20.67■□□□□ 0.9
GRAMD1A-207ENST00000598118 NOP56O00567 594 aaKnown RBP20.66■□□□□ 0.9
GRAMD1A-207ENST00000598118 ACKR2O00590 384 aa20.66■□□□□ 0.9
GRAMD1A-207ENST00000598118 B4GALT4O60513 344 aa20.66■□□□□ 0.9
GRAMD1A-207ENST00000598118 DNAJC8O75937 253 aaPredicted RBP20.66■□□□□ 0.9
GRAMD1A-207ENST00000598118 ABHD2P08910 425 aa20.66■□□□□ 0.9
GRAMD1A-207ENST00000598118 CXCL8P10145 99 aa20.66■□□□□ 0.9
GRAMD1A-207ENST00000598118 CD19P15391 556 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms