RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 CCDC149Q6ZUS6 474 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 LRRTM3Q86VH5 581 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 CREBRFQ8IUR6 639 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 C2orf15Q8WU43 125 aaKnown RBP21.74■■□□□ 1.07
PNKP-211ENST00000598020 ATXN2LQ8WWM7 1075 aaKnown RBP21.74■■□□□ 1.07
PNKP-211ENST00000598020 ELMO3Q96BJ8 720 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 PKMYT1Q99640 499 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 TUBGCP2Q9BSJ2 902 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 SDCBP2Q9H190 292 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 SNX25Q9H3E2 840 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 SMYD3Q9H7B4 428 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 ZDHHC7Q9NXF8 308 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 CDH9Q9ULB4 789 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 EYSQ5T1H1 3165 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 GTPBP10A4D1E9 387 aaKnown RBP21.73■■□□□ 1.07
PNKP-211ENST00000598020 H3BQ06 376 aaPredicted RBP21.73■■□□□ 1.07
PNKP-211ENST00000598020 VNN2O95498 520 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 POU2F2P09086 479 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 OR4Q2P0C623 313 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 ZNF18P17022 549 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 LMO2P25791 158 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 HOXA9P31269 272 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 ZNF165P49910 485 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 ITIH3Q06033 890 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 LIN9Q5TKA1 542 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 FAM171BQ6P995 826 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 CYP26C1Q6V0L0 522 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 RNF19BQ6ZMZ0 732 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 EHBP1Q8NDI1 1231 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 HSD3B7Q9H2F3 369 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 ADAM7Q9H2U9 754 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 NME7Q9Y5B8 376 aa21.73■■□□□ 1.07
PNKP-211ENST00000598020 MTMR11A4FU01 709 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 SMTNL1A8MU46 457 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 CLSTN1O94985 981 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 C8AP07357 584 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 HNRNPA1P09651 372 aaKnown RBP eCLIP21.72■■□□□ 1.07
PNKP-211ENST00000598020 ELF1P32519 619 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 CDH8P55286 799 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 ADCY1Q08828 1119 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 INCA1Q0VD86 236 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 SMAD4Q13485 552 aaKnown RBP21.72■■□□□ 1.07
PNKP-211ENST00000598020 NFE2Q16621 373 aaPredicted RBP21.72■■□□□ 1.07
PNKP-211ENST00000598020 VWA3BQ502W6 1294 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 SLC39A12Q504Y0 691 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 MIIPQ5JXC2 388 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 UNC93AQ86WB7 457 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 DHX40Q8IX18 779 aaKnown RBP21.72■■□□□ 1.07
PNKP-211ENST00000598020 TTC39CQ8N584 583 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 AOPEPQ8N6M6 819 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 OR6B3Q8NGW1 331 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.72■■□□□ 1.07
PNKP-211ENST00000598020 TATDN2Q93075 761 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 NDST4Q9H3R1 872 aa21.72■■□□□ 1.07
PNKP-211ENST00000598020 LRRC10BA6NIK2 292 aa21.71■■□□□ 1.07
PNKP-211ENST00000598020 HCRTO43612 131 aa21.71■■□□□ 1.07
PNKP-211ENST00000598020 SEC24AO95486 1093 aa21.71■■□□□ 1.07
PNKP-211ENST00000598020 ACAT1P24752 427 aaKnown RBP21.71■■□□□ 1.07
PNKP-211ENST00000598020 MRPS5P82675 430 aaKnown RBP21.71■■□□□ 1.07
PNKP-211ENST00000598020 TFF2Q03403 129 aa21.71■■□□□ 1.07
PNKP-211ENST00000598020 IQCB1Q15051 598 aa21.71■■□□□ 1.07
PNKP-211ENST00000598020 MAPRE1Q15691 268 aaKnown RBP21.71■■□□□ 1.07
PNKP-211ENST00000598020 HSP90AA4PQ58FG1 418 aa21.71■■□□□ 1.07
PNKP-211ENST00000598020 SCARA5Q6ZMJ2 495 aa21.71■■□□□ 1.07
PNKP-211ENST00000598020 C12orf76Q8N812 135 aaPredicted RBP21.71■■□□□ 1.07
PNKP-211ENST00000598020 SPPL2BQ8TCT7 592 aa21.71■■□□□ 1.07
PNKP-211ENST00000598020 SYT15Q9BQS2 421 aa21.71■■□□□ 1.07
PNKP-211ENST00000598020 CYP4F11Q9HBI6 524 aa21.71■■□□□ 1.07
PNKP-211ENST00000598020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.71■■□□□ 1.07
PNKP-211ENST00000598020 PRUNE2Q8WUY3 3088 aa21.71■■□□□ 1.07
PNKP-211ENST00000598020 A8MXQ7 604 aa21.7■■□□□ 1.06
PNKP-211ENST00000598020 PDGFRBP09619 1106 aa21.7■■□□□ 1.06
PNKP-211ENST00000598020 WEE2P0C1S8 567 aa21.7■■□□□ 1.06
PNKP-211ENST00000598020 RAP1GAPP47736 663 aa21.7■■□□□ 1.06
PNKP-211ENST00000598020 PPM1LQ5SGD2 360 aa21.7■■□□□ 1.06
PNKP-211ENST00000598020 GPR149Q86SP6 731 aa21.7■■□□□ 1.06
PNKP-211ENST00000598020 SLC7A14Q8TBB6 771 aa21.7■■□□□ 1.06
PNKP-211ENST00000598020 SUSD6Q92537 303 aa21.7■■□□□ 1.06
PNKP-211ENST00000598020 ZNF707Q96C28 371 aaPredicted RBP21.7■■□□□ 1.06
PNKP-211ENST00000598020 NT5C1BQ96P26 610 aa21.7■■□□□ 1.06
PNKP-211ENST00000598020 PRKD2Q9BZL6 878 aa21.7■■□□□ 1.06
PNKP-211ENST00000598020 ABCB6Q9NP58 842 aa21.7■■□□□ 1.06
PNKP-211ENST00000598020 CRTAC1Q9NQ79 661 aa21.7■■□□□ 1.06
PNKP-211ENST00000598020 TMLHEQ9NVH6 421 aa21.7■■□□□ 1.06
PNKP-211ENST00000598020 LIMA1Q9UHB6 759 aaKnown RBP21.7■■□□□ 1.06
PNKP-211ENST00000598020 CCDC195A0A1B0GUA6 201 aa21.69■■□□□ 1.06
PNKP-211ENST00000598020 MYBPHLA2RUH7 354 aa21.69■■□□□ 1.06
PNKP-211ENST00000598020 GRXCR2A6NFK2 248 aa21.69■■□□□ 1.06
PNKP-211ENST00000598020 PRRG1O14668 218 aa21.69■■□□□ 1.06
PNKP-211ENST00000598020 MBTPS2O43462 519 aa21.69■■□□□ 1.06
PNKP-211ENST00000598020 RFPL2O75678 378 aa21.69■■□□□ 1.06
PNKP-211ENST00000598020 TBXAS1P24557 533 aaPredicted RBP21.69■■□□□ 1.06
PNKP-211ENST00000598020 CUL2Q13617 745 aa21.69■■□□□ 1.06
PNKP-211ENST00000598020 KRT31Q15323 416 aa21.69■■□□□ 1.06
PNKP-211ENST00000598020 RARS2Q5T160 578 aaKnown RBP21.69■■□□□ 1.06
PNKP-211ENST00000598020 CES5AQ6NT32 575 aa21.69■■□□□ 1.06
PNKP-211ENST00000598020 GBP6Q6ZN66 633 aa21.69■■□□□ 1.06
PNKP-211ENST00000598020 CRYBG2Q8N1P7 616 aa21.69■■□□□ 1.06
PNKP-211ENST00000598020 ATAD1Q8NBU5 361 aa21.69■■□□□ 1.06
PNKP-211ENST00000598020 MYCBPAPQ8TBZ2 947 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms