RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 VDRP11473 427 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 TYMPP19971 482 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 ALDH7A1P49419 539 aaKnown RBP15.6■□□□□ 0.09
VRK3-212ENST00000596814 HTRA4P83105 476 aaPredicted RBP15.6■□□□□ 0.09
VRK3-212ENST00000596814 CYP27A1Q02318 531 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 SGO2Q562F6 1265 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 ACOT1Q86TX2 421 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 PHOSPHO2Q8TCD6 241 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 TFAP2BQ92481 460 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 TNIP3Q96KP6 325 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 HEXIM2Q96MH2 286 aaKnown RBP15.6■□□□□ 0.09
VRK3-212ENST00000596814 ZBED2Q9BTP6 218 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 LUC7LQ9NQ29 371 aaKnown RBP15.6■□□□□ 0.09
VRK3-212ENST00000596814 DDX43Q9NXZ2 648 aaKnown RBP15.6■□□□□ 0.09
VRK3-212ENST00000596814 NAGPAQ9UK23 515 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 PPP2R2CQ9Y2T4 447 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 REXO2Q9Y3B8 237 aaKnown RBP15.6■□□□□ 0.09
VRK3-212ENST00000596814 MRPL42Q9Y6G3 142 aaKnown RBP15.6■□□□□ 0.09
VRK3-212ENST00000596814 VWA8A3KMH1 1905 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 CARNS1A5YM72 827 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 ZSCAN12O43309 604 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 HCRTO43612 131 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 PDGFRBP09619 1106 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 ATP2A2P16615 1042 aaKnown RBP15.59■□□□□ 0.09
VRK3-212ENST00000596814 LAG3P18627 525 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 LMO2P25791 158 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 MAGEA10P43363 369 aaPredicted RBP15.59■□□□□ 0.09
VRK3-212ENST00000596814 CCDC122Q5T0U0 273 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 FUT10Q6P4F1 479 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 ALKBH5Q6P6C2 394 aaKnown RBP15.59■□□□□ 0.09
VRK3-212ENST00000596814 TRIM72Q6ZMU5 477 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 TMEM173Q86WV6 379 aaPredicted RBP15.59■□□□□ 0.09
VRK3-212ENST00000596814 PALB2Q86YC2 1186 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 HERC6Q8IVU3 1022 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 ZNF558Q96NG5 402 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 ZSWIM1Q9BR11 485 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 DPEP3Q9H4B8 488 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 KIAA1257Q9ULG3 409 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 NENFQ9UMX5 172 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 INSL6Q9Y581 213 aa15.59■□□□□ 0.09
VRK3-212ENST00000596814 SYN3O14994 580 aa15.58■□□□□ 0.08
VRK3-212ENST00000596814 CCP110O43303 1012 aa15.58■□□□□ 0.08
VRK3-212ENST00000596814 SSTR3P32745 418 aaPredicted RBP15.58■□□□□ 0.08
VRK3-212ENST00000596814 ELAVL2Q12926 359 aaKnown RBP15.58■□□□□ 0.08
VRK3-212ENST00000596814 OVOS1Q6IE37 1185 aa15.58■□□□□ 0.08
VRK3-212ENST00000596814 KCNT2Q6UVM3 1135 aa15.58■□□□□ 0.08
VRK3-212ENST00000596814 KIAA1328Q86T90 577 aa15.58■□□□□ 0.08
VRK3-212ENST00000596814 CCAR2Q8N163 923 aaKnown RBP15.58■□□□□ 0.08
VRK3-212ENST00000596814 CRYBG2Q8N1P7 616 aa15.58■□□□□ 0.08
VRK3-212ENST00000596814 C17orf53Q8N3J3 647 aaPredicted RBP15.58■□□□□ 0.08
VRK3-212ENST00000596814 PCDHB18PQ96TA0 734 aa15.58■□□□□ 0.08
VRK3-212ENST00000596814 PCDHGC3Q9UN70 934 aa15.58■□□□□ 0.08
VRK3-212ENST00000596814 ACAT1P24752 427 aaKnown RBP15.57■□□□□ 0.08
VRK3-212ENST00000596814 PCSK1P29120 753 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 TKTP29401 623 aaKnown RBP15.57■□□□□ 0.08
VRK3-212ENST00000596814 MAGEA1P43355 309 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 PSMC1P62191 440 aaKnown RBP15.57■□□□□ 0.08
VRK3-212ENST00000596814 YWHAHQ04917 246 aaPredicted RBP15.57■□□□□ 0.08
VRK3-212ENST00000596814 STILQ15468 1287 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 CLEC16AQ2KHT3 1053 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 C10orf76Q5T2E6 689 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 RASIP1Q5U651 963 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 PASD1Q8IV76 773 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 C12orf29Q8N999 325 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 COLGALT1Q8NBJ5 622 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 B3GALNT2Q8NCR0 500 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 BCL7CQ8WUZ0 217 aaPredicted RBP15.57■□□□□ 0.08
VRK3-212ENST00000596814 SYT15Q9BQS2 421 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 TRMT1Q9NXH9 659 aaKnown RBP15.57■□□□□ 0.08
VRK3-212ENST00000596814 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.57■□□□□ 0.08
VRK3-212ENST00000596814 CEP83Q9Y592 693 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 PCDHA13Q9Y5I0 950 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 TMCO5BA8MYB1 307 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 ESPNB1AK53 854 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 O00370 1275 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 CFHP08603 1231 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 GZMAP12544 262 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 VAV2P52735 878 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 CNGA2Q16280 664 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 FAM171A1Q5VUB5 890 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.57■□□□□ 0.08
VRK3-212ENST00000596814 THEM5Q8N1Q8 247 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 TXLNBQ8N3L3 684 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 FIBCD1Q8N539 461 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 IGSF21Q96ID5 467 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 RAD9AQ99638 391 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 RTP3Q9BQQ7 232 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 GPR62Q9BZJ7 368 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 KCND1Q9NSA2 647 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 FAM49BQ9NUQ9 324 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 TAS2R14Q9NYV8 317 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 CDH9Q9ULB4 789 aa15.57■□□□□ 0.08
VRK3-212ENST00000596814 ATP8B3O60423 1300 aa15.56■□□□□ 0.08
VRK3-212ENST00000596814 USP27XA6NNY8 438 aa15.56■□□□□ 0.08
VRK3-212ENST00000596814 TLL1O43897 1013 aa15.56■□□□□ 0.08
VRK3-212ENST00000596814 MICAL2O94851 1124 aa15.56■□□□□ 0.08
VRK3-212ENST00000596814 LSM8O95777 96 aaKnown RBP15.56■□□□□ 0.08
VRK3-212ENST00000596814 CYP1A1P04798 512 aaPredicted RBP15.56■□□□□ 0.08
VRK3-212ENST00000596814 FGFR3P22607 806 aa15.56■□□□□ 0.08
VRK3-212ENST00000596814 NOMO3P69849 1222 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms