RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 AASDHQ4L235 1098 aaPredicted RBP10.79□□□□□ -0.68
LIG1-209ENST00000596104 SLC39A12Q504Y0 691 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 RILPL1Q5EBL4 403 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 PLA2G2CQ5R387 149 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 KBTBD6Q86V97 674 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 CMTM8Q8IZV2 173 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 GIPC2Q8TF65 315 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 FAM212AQ96EL1 285 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 MSTO1Q9BUK6 570 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 CCSER1Q9C0I3 900 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 THG1LQ9NWX6 298 aaKnown RBP10.79□□□□□ -0.68
LIG1-209ENST00000596104 DSEQ9UL01 958 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 CCL26Q9Y258 94 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 DERAQ9Y315 318 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 CITO14578 2027 aa10.79□□□□□ -0.68
LIG1-209ENST00000596104 K7ENM7 598 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 CYB561D2O14569 222 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 RPP40O75818 363 aaKnown RBP10.78□□□□□ -0.68
LIG1-209ENST00000596104 AKAP3O75969 853 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 F11P03951 625 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 NMT1P30419 496 aaKnown RBP10.78□□□□□ -0.68
LIG1-209ENST00000596104 SHC2P98077 582 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 SMARCB1Q12824 385 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 RUNX3Q13761 415 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 PTPAQ15257 358 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 N4BP2L1Q5TBK1 243 aaPredicted RBP10.78□□□□□ -0.68
LIG1-209ENST00000596104 WSCD1Q658N2 575 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 ARL6IP4Q66PJ3 421 aaKnown RBP10.78□□□□□ -0.68
LIG1-209ENST00000596104 TRIM68Q6AZZ1 485 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 IL31Q6EBC2 164 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 CACNA2D4Q7Z3S7 1137 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 GPBP1Q86WP2 473 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 C12orf50Q8NA57 414 aaPredicted RBP10.78□□□□□ -0.68
LIG1-209ENST00000596104 SPPL2BQ8TCT7 592 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 C2orf15Q8WU43 125 aaKnown RBP10.78□□□□□ -0.68
LIG1-209ENST00000596104 USP13Q92995 863 aaPredicted RBP10.78□□□□□ -0.68
LIG1-209ENST00000596104 CDK5RAP3Q96JB5 506 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 GCNAQ96QF7 691 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 EBF3Q9H4W6 596 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 ASB7Q9H672 318 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 PARVGQ9HBI0 331 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 FBRSL1Q9HCM7 1045 aaKnown RBP10.78□□□□□ -0.68
LIG1-209ENST00000596104 BLOC1S4Q9NUP1 217 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 POLR3BQ9NW08 1133 aaPredicted RBP10.78□□□□□ -0.68
LIG1-209ENST00000596104 ZMYM5Q9UJ78 669 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 ANGPTL2Q9UKU9 493 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 C2CD2Q9Y426 696 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 PCDHGA5Q9Y5G8 931 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 CNOT1A5YKK6 2376 aaKnown RBP10.78□□□□□ -0.68
LIG1-209ENST00000596104 ZFHX4Q86UP3 3567 aa10.78□□□□□ -0.68
LIG1-209ENST00000596104 PDCD11Q14690 1871 aaKnown RBP10.77□□□□□ -0.69
LIG1-209ENST00000596104 TISP43B9A030 160 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 ANKRD63C9JTQ0 380 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 SLC26A4O43511 780 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 TRAK2O60296 914 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 RNF40O75150 1001 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 FAM13AO94988 1023 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 EGFP01133 1207 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 ARSAP15289 507 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 KCNA4P22459 653 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 ACOT2P49753 483 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 TAF6P49848 677 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 NLRP12P59046 1061 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 GTF2BQ00403 316 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 GRSF1Q12849 480 aaKnown RBP eCLIP10.77□□□□□ -0.69
LIG1-209ENST00000596104 STPG1Q5TH74 334 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 NAIF1Q69YI7 327 aaPredicted RBP10.77□□□□□ -0.69
LIG1-209ENST00000596104 METTL23Q86XA0 190 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 EFCAB13Q8IY85 973 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 MYCT1Q8N699 235 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 MAB21L3Q8N8X9 362 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 CHAMP1Q96JM3 812 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 ZC3H10Q96K80 434 aaKnown RBP10.77□□□□□ -0.69
LIG1-209ENST00000596104 AK8Q96MA6 479 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 PYM1Q9BRP8 204 aaKnown RBP10.77□□□□□ -0.69
LIG1-209ENST00000596104 KIF9Q9HAQ2 790 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 TDP1Q9NUW8 608 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 TMLHEQ9NVH6 421 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 ABI2Q9NYB9 513 aaPredicted RBP10.77□□□□□ -0.69
LIG1-209ENST00000596104 STYXL1Q9Y6J8 313 aa10.77□□□□□ -0.69
LIG1-209ENST00000596104 SOBPA7XYQ1 873 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 ATG13O75143 517 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 TADA3O75528 432 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 CCDC192P0DO97 292 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 DDX6P26196 483 aaKnown RBP eCLIP10.76□□□□□ -0.69
LIG1-209ENST00000596104 AVPR1AP37288 418 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 MPLP40238 635 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 GPR15P49685 360 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 POU5F1Q01860 360 aaKnown RBP10.76□□□□□ -0.69
LIG1-209ENST00000596104 MCM6Q14566 821 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 TAF12Q16514 161 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 PLK5Q496M5 336 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 TXNDC8Q6A555 127 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 MCTP1Q6DN14 999 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 CRELD2Q6UXH1 353 aaPredicted RBP10.76□□□□□ -0.69
LIG1-209ENST00000596104 MON1AQ86VX9 555 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 THEM5Q8N1Q8 247 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 CAMKK1Q8N5S9 505 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 STKLD1Q8NE28 680 aa10.76□□□□□ -0.69
LIG1-209ENST00000596104 EZH1Q92800 747 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms