RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 VIPR2P41587 438 aa19.3■□□□□ 0.68
HOMER3-208ENST00000595756 TUFMP49411 452 aaKnown RBP19.3■□□□□ 0.68
HOMER3-208ENST00000595756 VEPH1Q14D04 833 aa19.3■□□□□ 0.68
HOMER3-208ENST00000595756 THEM5Q8N1Q8 247 aa19.3■□□□□ 0.68
HOMER3-208ENST00000595756 SPPL2BQ8TCT7 592 aa19.3■□□□□ 0.68
HOMER3-208ENST00000595756 SAAL1Q96ER3 474 aa19.3■□□□□ 0.68
HOMER3-208ENST00000595756 BORCS6Q96GS4 357 aa19.3■□□□□ 0.68
HOMER3-208ENST00000595756 MSANTD3Q96H12 275 aa19.3■□□□□ 0.68
HOMER3-208ENST00000595756 SEPT5Q99719 369 aaPredicted RBP19.3■□□□□ 0.68
HOMER3-208ENST00000595756 TMEM206Q9H813 350 aa19.3■□□□□ 0.68
HOMER3-208ENST00000595756 GDPD2Q9HCC8 539 aa19.3■□□□□ 0.68
HOMER3-208ENST00000595756 PANK4Q9NVE7 773 aa19.3■□□□□ 0.68
HOMER3-208ENST00000595756 RBAKQ9NYW8 714 aaPredicted RBP19.3■□□□□ 0.68
HOMER3-208ENST00000595756 EP300Q09472 2414 aaPredicted RBP19.29■□□□□ 0.68
HOMER3-208ENST00000595756 FAM237AA0A1B0GTK4 181 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 HEPACAM2A8MVW5 462 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 ZNF263O14978 683 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 POLR2DO15514 142 aaKnown RBP19.29■□□□□ 0.68
HOMER3-208ENST00000595756 SOAT2O75908 522 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 ATF6P18850 670 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 MLLT6P55198 1093 aaPredicted RBP19.29■□□□□ 0.68
HOMER3-208ENST00000595756 WNT7BP56706 349 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 FCHO2Q0JRZ9 810 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 WSCD1Q658N2 575 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 GAREM2Q75VX8 874 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 DNAJB7Q7Z6W7 309 aaPredicted RBP19.29■□□□□ 0.68
HOMER3-208ENST00000595756 CCDC65Q8IXS2 484 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 SYCP3Q8IZU3 236 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 ZNF687Q8N1G0 1237 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 DHX58Q96C10 678 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 IER2Q9BTL4 223 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 MKNK1Q9BUB5 465 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 FGFBP2Q9BYJ0 223 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 PRMT8Q9NR22 394 aaPredicted RBP19.29■□□□□ 0.68
HOMER3-208ENST00000595756 PIAS3Q9Y6X2 628 aa19.29■□□□□ 0.68
HOMER3-208ENST00000595756 KIAA0391O15091 583 aaKnown RBP19.28■□□□□ 0.68
HOMER3-208ENST00000595756 CHADO15335 359 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 EXTL3O43909 919 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 GABRR2P28476 465 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 WEE1P30291 646 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 POLR2BP30876 1174 aaKnown RBP19.28■□□□□ 0.68
HOMER3-208ENST00000595756 TFAMQ00059 246 aaKnown RBP19.28■□□□□ 0.68
HOMER3-208ENST00000595756 FZD5Q13467 585 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 E2F4Q16254 413 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 MGAT5BQ3V5L5 792 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 ARHGAP15Q53QZ3 475 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 STXBP5Q5T5C0 1151 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 C1orf228Q6PIY5 440 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 STXBP4Q6ZWJ1 553 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 CEP57L1Q8IYX8 460 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 DCP1BQ8IZD4 617 aaKnown RBP19.28■□□□□ 0.68
HOMER3-208ENST00000595756 LRRC52Q8N7C0 313 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 C1orf127Q8N9H9 656 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 ZSWIM2Q8NEG5 633 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 CACTINQ8WUQ7 758 aaKnown RBP19.28■□□□□ 0.68
HOMER3-208ENST00000595756 RSPRY1Q96DX4 576 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 CCDC34Q96HJ3 373 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 LPIN3Q9BQK8 851 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 CBWD1Q9BRT8 395 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 OBP2AQ9NY56 170 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 ITGA11Q9UKX5 1188 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 HPSEQ9Y251 543 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 PCDHGA2Q9Y5H1 932 aa19.28■□□□□ 0.68
HOMER3-208ENST00000595756 A0A1B0GVL5 298 aa19.27■□□□□ 0.68
HOMER3-208ENST00000595756 KINO60870 393 aaKnown RBP19.27■□□□□ 0.68
HOMER3-208ENST00000595756 ITGB3P05106 788 aa19.27■□□□□ 0.68
HOMER3-208ENST00000595756 PFKFB1P16118 471 aa19.27■□□□□ 0.68
HOMER3-208ENST00000595756 CDC25CP30307 473 aa19.27■□□□□ 0.68
HOMER3-208ENST00000595756 SYKP43405 635 aa19.27■□□□□ 0.68
HOMER3-208ENST00000595756 YAF2Q8IY57 180 aa19.27■□□□□ 0.68
HOMER3-208ENST00000595756 GCNAQ96QF7 691 aa19.27■□□□□ 0.68
HOMER3-208ENST00000595756 CHRDQ9H2X0 955 aa19.27■□□□□ 0.68
HOMER3-208ENST00000595756 ATXN3LQ9H3M9 355 aa19.27■□□□□ 0.68
HOMER3-208ENST00000595756 KBTBD4Q9NVX7 518 aa19.27■□□□□ 0.68
HOMER3-208ENST00000595756 ZMYM5Q9UJ78 669 aa19.27■□□□□ 0.68
HOMER3-208ENST00000595756 SLFN14P0C7P3 912 aa19.26■□□□□ 0.67
HOMER3-208ENST00000595756 HAPLN1P10915 354 aaPredicted RBP19.26■□□□□ 0.67
HOMER3-208ENST00000595756 TSPY1Q01534 308 aa19.26■□□□□ 0.67
HOMER3-208ENST00000595756 GPR158Q5T848 1215 aa19.26■□□□□ 0.67
HOMER3-208ENST00000595756 LRRTM3Q86VH5 581 aa19.26■□□□□ 0.67
HOMER3-208ENST00000595756 ARID3BQ8IVW6 561 aaPredicted RBP19.26■□□□□ 0.67
HOMER3-208ENST00000595756 TMEM86AQ8N2M4 240 aa19.26■□□□□ 0.67
HOMER3-208ENST00000595756 GPD1LQ8N335 351 aa19.26■□□□□ 0.67
HOMER3-208ENST00000595756 FSIP1Q8NA03 581 aa19.26■□□□□ 0.67
HOMER3-208ENST00000595756 CXorf38Q8TB03 319 aa19.26■□□□□ 0.67
HOMER3-208ENST00000595756 SPATA18Q8TC71 538 aa19.26■□□□□ 0.67
HOMER3-208ENST00000595756 FAM200AQ8TCP9 573 aa19.26■□□□□ 0.67
HOMER3-208ENST00000595756 CSGALNACT1Q8TDX6 532 aa19.26■□□□□ 0.67
HOMER3-208ENST00000595756 FAM3CQ92520 227 aa19.26■□□□□ 0.67
HOMER3-208ENST00000595756 NELL1Q92832 810 aa19.26■□□□□ 0.67
HOMER3-208ENST00000595756 TRIM9Q9C026 710 aa19.26■□□□□ 0.67
HOMER3-208ENST00000595756 IL21Q9HBE4 155 aa19.26■□□□□ 0.67
HOMER3-208ENST00000595756 ABI2Q9NYB9 513 aaPredicted RBP19.26■□□□□ 0.67
HOMER3-208ENST00000595756 NDRG2Q9UN36 371 aaKnown RBP19.26■□□□□ 0.67
HOMER3-208ENST00000595756 PRPF6O94906 941 aaKnown RBP19.25■□□□□ 0.67
HOMER3-208ENST00000595756 MYL1P05976 194 aa19.25■□□□□ 0.67
HOMER3-208ENST00000595756 CSTF1Q05048 431 aaKnown RBP19.25■□□□□ 0.67
HOMER3-208ENST00000595756 NFE2Q16621 373 aaPredicted RBP19.25■□□□□ 0.67
HOMER3-208ENST00000595756 CNNM4Q6P4Q7 775 aa19.25■□□□□ 0.67
HOMER3-208ENST00000595756 PDCL2Q8N4E4 241 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms