RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 NTHL1P78549 312 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 ZP2Q05996 745 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 DUSP4Q13115 394 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 CCDC183Q5T5S1 534 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 FRMD5Q7Z6J6 570 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 TCEAL8Q8IYN2 117 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 RIPOR3Q96MK2 946 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 UHRF1Q96T88 793 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 LPIN3Q9BQK8 851 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 OXCT2Q9BYC2 517 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 PIDD1Q9HB75 910 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 APOBEC3GQ9HC16 384 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 HCFC1R1Q9NWW0 138 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 DPP7Q9UHL4 492 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 SLC27A5Q9Y2P5 690 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 INSL5Q9Y5Q6 135 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 PAPLNO95428 1278 aa14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 PDGFRBP09619 1106 aa14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 WARSP23381 471 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 GTF2H1P32780 548 aa14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 MYL7Q01449 175 aa14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 SGSM1Q2NKQ1 1148 aa14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 INTS6LQ5JSJ4 861 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 ATAT1Q5SQI0 421 aa14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 KRT39Q6A163 491 aa14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 CAVIN1Q6NZI2 390 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 CCDC149Q6ZUS6 474 aa14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 DPH6Q7L8W6 267 aa14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 RPGRIP1Q96KN7 1286 aa14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 PKMYT1Q99640 499 aa14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 DPEP3Q9H4B8 488 aa14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 VRTNQ9H8Y1 702 aa14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 YIPF1Q9Y548 306 aa14.76□□□□□ -0.05
SHKBP1-207ENST00000595631 MYBPHLA2RUH7 354 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 HNRNPA1P09651 372 aaKnown RBP eCLIP14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 ASPAP45381 313 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 LHX1P48742 406 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 NOP14P78316 857 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 TSPY1Q01534 308 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 TWF1Q12792 350 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 UVSSAQ2YD98 709 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 HSP90AA4PQ58FG1 418 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 C11orf57Q6ZUT1 292 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 GRASPQ7Z6J2 395 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 IRF2BP1Q8IU81 584 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 CREBRFQ8IUR6 639 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 ADHFE1Q8IWW8 467 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 OR6B3Q8NGW1 331 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 CNOT6LQ96LI5 555 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 SYT15Q9BQS2 421 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 ACBD6Q9BR61 282 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 PHF7Q9BWX1 381 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 RHOBTB2Q9BYZ6 727 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 SNX25Q9H3E2 840 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 METTL14Q9HCE5 456 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 CRTAC1Q9NQ79 661 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 ABI2Q9NYB9 513 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 GTF3C4Q9UKN8 822 aa14.75□□□□□ -0.05
SHKBP1-207ENST00000595631 CLUHO75153 1309 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 PATJQ8NI35 1801 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 STX10O60499 249 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 TACC1O75410 805 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 LRG1P02750 347 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 HOXA9P31269 272 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 GNL1P36915 607 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 FMO5P49326 533 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 ORC1Q13415 861 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 TRIM59Q8IWR1 403 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 DCP1BQ8IZD4 617 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 STKLD1Q8NE28 680 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 FBXL13Q8NEE6 735 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 SPATA18Q8TC71 538 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 TAF4BQ92750 862 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 TATDN2Q93075 761 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 NECTIN4Q96NY8 510 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 SEPT5Q99719 369 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 WDR6Q9NNW5 1121 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 RAB20Q9NX57 234 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 CEP72Q9P209 647 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 DNMT3BQ9UBC3 853 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 PRKAG3Q9UGI9 489 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 HMGXB4Q9UGU5 601 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 DACH1Q9UI36 760 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 ANAPC1Q9H1A4 1944 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 MYO16Q9Y6X6 1858 aa14.74□□□□□ -0.05
SHKBP1-207ENST00000595631 C19orf67A6NJJ6 358 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 C2CD4DB7Z1M9 353 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 NRG2O14511 850 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 N4BP1O75113 896 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 XYLBO75191 536 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 GNA14O95837 355 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 ERCC5P28715 1186 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 PCSK1P29120 753 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 SSTR3P32745 418 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 GPR15P49685 360 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 MARSP56192 900 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 TPD52L1Q16890 204 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 MGAT5BQ3V5L5 792 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 MDH1BQ5I0G3 518 aa14.73□□□□□ -0.05
SHKBP1-207ENST00000595631 SASS6Q6UVJ0 657 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms