RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 POU5F1BQ06416 359 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 CCINQ13939 588 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 PON2Q15165 354 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 NAB2Q15742 525 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 TMEM119Q4V9L6 283 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 SOWAHCQ53LP3 525 aaPredicted RBP13.92□□□□□ -0.18
SCAF1-202ENST00000595242 COBLL1Q53SF7 1204 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 CDKAL1Q5VV42 579 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 SPATA1Q5VX52 437 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 ANKS3Q6ZW76 656 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 RALGPS2Q86X27 583 aaPredicted RBP13.92□□□□□ -0.18
SCAF1-202ENST00000595242 DRC7Q8IY82 874 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 SYNPOQ8N3V7 929 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 ETNPPLQ8TBG4 499 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 CALML4Q96GE6 196 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 C7orf25Q9BPX7 421 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 CXCL16Q9H2A7 254 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 CYP4F11Q9HBI6 524 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 SPTLC3Q9NUV7 552 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 FANCLQ9NW38 375 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 LRWD1Q9UFC0 647 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 NFE2L3Q9Y4A8 694 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 CACNA1EQ15878 2313 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 MYO16Q9Y6X6 1858 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 LNP1A1A4G5 178 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 MYBPHLA2RUH7 354 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 CHADO15335 359 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 MOSPD3O75425 235 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 AKAP3O75969 853 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 P4HBP07237 508 aaKnown RBP13.91□□□□□ -0.18
SCAF1-202ENST00000595242 GJA1P17302 382 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 CSRP1P21291 193 aaKnown RBP13.91□□□□□ -0.18
SCAF1-202ENST00000595242 IGFBP6P24592 240 aaPredicted RBP13.91□□□□□ -0.18
SCAF1-202ENST00000595242 TKTP29401 623 aaKnown RBP13.91□□□□□ -0.18
SCAF1-202ENST00000595242 PPP1R2P41236 205 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 TXKP42681 527 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 CREB5Q02930 508 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 PLK5Q496M5 336 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 XKR9Q5GH70 373 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 KIAA1211LQ6NV74 962 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 OTUD6AQ7L8S5 288 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 HS6ST3Q8IZP7 471 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 TTC8Q8TAM2 541 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 E2F7Q96AV8 911 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 DDX27Q96GQ7 796 aaKnown RBP13.91□□□□□ -0.18
SCAF1-202ENST00000595242 PNMA5Q96PV4 448 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 BLZF1Q9H2G9 400 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 RWDD2AQ9UIY3 292 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 NEUROG3Q9Y4Z2 214 aa13.91□□□□□ -0.18
SCAF1-202ENST00000595242 CITO14578 2027 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 B3GAT3O94766 335 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 SEC24AO95486 1093 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 MYL4P12829 197 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 ATF2P15336 505 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 AMPD3Q01432 767 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 FCHO2Q0JRZ9 810 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 CAPSQ13938 189 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 TEAD2Q15562 447 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 IQCEQ6IPM2 695 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 SLC8B1Q6J4K2 584 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 PKN3Q6P5Z2 889 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 LRRC8AQ8IWT6 810 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 C4orf19Q8IY42 314 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 SLFN12Q8IYM2 578 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 TCEAL8Q8IYN2 117 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 ELMOD1Q8N336 334 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 CCDC150Q8NCX0 1101 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 RASSF8Q8NHQ8 419 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 CACTINQ8WUQ7 758 aaKnown RBP13.9□□□□□ -0.18
SCAF1-202ENST00000595242 RSPRY1Q96DX4 576 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 ZNF512Q96ME7 567 aaPredicted RBP13.9□□□□□ -0.18
SCAF1-202ENST00000595242 ZNF830Q96NB3 372 aaPredicted RBP13.9□□□□□ -0.18
SCAF1-202ENST00000595242 TRIM9Q9C026 710 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 DUSP15Q9H1R2 295 aaPredicted RBP13.9□□□□□ -0.18
SCAF1-202ENST00000595242 XPNPEP1Q9NQW7 623 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 BLOC1S4Q9NUP1 217 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 SNTG2Q9NY99 539 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 GTSE1Q9NYZ3 720 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 INSL5Q9Y5Q6 135 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 GON4LQ3T8J9 2241 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 ADAMTS9Q9P2N4 1935 aa13.9□□□□□ -0.18
SCAF1-202ENST00000595242 CELSR3Q9NYQ7 3312 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 SHROOM3Q8TF72 1996 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 TMEM189-UBE2V1I3L0A0 370 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 I3L4J1 428 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 ZBTB39O15060 712 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 TRAPPC3O43617 180 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 HYAL3O43820 417 aaPredicted RBP13.89□□□□□ -0.19
SCAF1-202ENST00000595242 ARPP19P56211 112 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 UBASH3AP57075 661 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 PPP2R5CQ13362 524 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 KMT5BQ4FZB7 885 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 KRT79Q5XKE5 535 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 APTXQ7Z2E3 356 aaKnown RBP13.89□□□□□ -0.19
SCAF1-202ENST00000595242 VSTM4Q8IW00 320 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 ASAP3Q8TDY4 903 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 LXNQ9BS40 222 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 NFKBIZQ9BYH8 718 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 LRRC27Q9C0I9 530 aa13.89□□□□□ -0.19
SCAF1-202ENST00000595242 GPR88Q9GZN0 384 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms