RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 YAF2Q8IY57 180 aa13.49□□□□□ -0.25
UPF1-203ENST00000594504 FAM200AQ8TCP9 573 aa13.49□□□□□ -0.25
UPF1-203ENST00000594504 GIPC2Q8TF65 315 aa13.49□□□□□ -0.25
UPF1-203ENST00000594504 HVCN1Q96D96 273 aa13.49□□□□□ -0.25
UPF1-203ENST00000594504 SEPT5Q99719 369 aaPredicted RBP13.49□□□□□ -0.25
UPF1-203ENST00000594504 OXCT2Q9BYC2 517 aaPredicted RBP13.49□□□□□ -0.25
UPF1-203ENST00000594504 GPR88Q9GZN0 384 aa13.49□□□□□ -0.25
UPF1-203ENST00000594504 CHRDQ9H2X0 955 aa13.49□□□□□ -0.25
UPF1-203ENST00000594504 GOLPH3LQ9H4A5 285 aa13.49□□□□□ -0.25
UPF1-203ENST00000594504 MRPL44Q9H9J2 332 aaKnown RBP13.49□□□□□ -0.25
UPF1-203ENST00000594504 TRPV5Q9NQA5 729 aa13.49□□□□□ -0.25
UPF1-203ENST00000594504 PRMT8Q9NR22 394 aaPredicted RBP13.49□□□□□ -0.25
UPF1-203ENST00000594504 RBM12Q9NTZ6 932 aaKnown RBP13.49□□□□□ -0.25
UPF1-203ENST00000594504 TBC1D7Q9P0N9 293 aa13.49□□□□□ -0.25
UPF1-203ENST00000594504 NCDNQ9UBB6 729 aa13.49□□□□□ -0.25
UPF1-203ENST00000594504 SERTAD1Q9UHV2 236 aa13.49□□□□□ -0.25
UPF1-203ENST00000594504 AGO2Q9UKV8 859 aaKnown RBP13.49□□□□□ -0.25
UPF1-203ENST00000594504 TCHHQ07283 1943 aa13.49□□□□□ -0.25
UPF1-203ENST00000594504 MED19A0JLT2 244 aaPredicted RBP13.48□□□□□ -0.25
UPF1-203ENST00000594504 CYB561D2O14569 222 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 TDGF1P13385 188 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 GABRR2P28476 465 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 AFMP43652 599 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 WNT7BP56706 349 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 ALCAMQ13740 583 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 LPAL2Q16609 132 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 RSPO4Q2I0M5 234 aaPredicted RBP13.48□□□□□ -0.25
UPF1-203ENST00000594504 MGAT5BQ3V5L5 792 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 GPR158Q5T848 1215 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 WSCD1Q658N2 575 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 EFCAB13Q8IY85 973 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 CSGALNACT1Q8TDX6 532 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 PSMG2Q969U7 264 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 BORCS6Q96GS4 357 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 IPO9Q96P70 1041 aaKnown RBP13.48□□□□□ -0.25
UPF1-203ENST00000594504 TSPAN18Q96SJ8 248 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 ZCWPW1Q9H0M4 648 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 SMG9Q9H0W8 520 aaKnown RBP13.48□□□□□ -0.25
UPF1-203ENST00000594504 DPP3Q9NY33 737 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 STYXL1Q9Y6J8 313 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 TSC2P49815 1807 aa13.48□□□□□ -0.25
UPF1-203ENST00000594504 CFAP54Q96N23 3096 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 KIF26AQ9ULI4 1882 aaPredicted RBP13.47□□□□□ -0.25
UPF1-203ENST00000594504 PVALEFA0A1B0GWK0 134 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 CHADO15335 359 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 PPP1R37O75864 691 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 GCNT3O95395 438 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 CYP11A1P05108 521 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 MYL1P05976 194 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 ATF6P18850 670 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 ADSSP30520 456 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 KPNA1P52294 538 aaPredicted RBP13.47□□□□□ -0.25
UPF1-203ENST00000594504 SATB1Q01826 763 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 DMWDQ09019 674 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 SLFN12LQ6IEE8 588 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 TXNDC11Q6PKC3 985 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 UNC13DQ70J99 1090 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 DGLUCYQ7Z3D6 616 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 STKLD1Q8NE28 680 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 POMGNT1Q8WZA1 660 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 PAGE5Q96GU1 130 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 FAM84AQ96KN4 292 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 STRA6Q9BX79 667 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 EPC1Q9H2F5 836 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 BLZF1Q9H2G9 400 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 ASB7Q9H672 318 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 IL21Q9HBE4 155 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 TMLHEQ9NVH6 421 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 C2orf42Q9NWW7 574 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 GTSE1Q9NYZ3 720 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 SMG5Q9UPR3 1016 aaKnown RBP13.47□□□□□ -0.25
UPF1-203ENST00000594504 DERAQ9Y315 318 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 PCDHB13Q9Y5F0 798 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 FAM186AA6NE01 2351 aa13.47□□□□□ -0.25
UPF1-203ENST00000594504 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.46□□□□□ -0.25
UPF1-203ENST00000594504 DPYSL4O14531 572 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 ZNF202O95125 648 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 PRAMEF12O95522 483 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 GPR15P49685 360 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 TAF6P49848 677 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 TNK2Q07912 1038 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 FCHO2Q0JRZ9 810 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 CUL4BQ13620 913 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 L1TD1Q5T7N2 865 aaKnown RBP13.46□□□□□ -0.25
UPF1-203ENST00000594504 KRBA2Q6ZNG9 492 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 STXBP4Q6ZWJ1 553 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 METTL23Q86XA0 190 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 GRAMD1CQ8IYS0 662 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 THEM5Q8N1Q8 247 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 E2F7Q96AV8 911 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 SAAL1Q96ER3 474 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 CCDC34Q96HJ3 373 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 SLC46A2Q9BY10 475 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 EXOC7Q9UPT5 735 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 C2CD2Q9Y426 696 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 ASB3Q9Y575 518 aa13.46□□□□□ -0.25
UPF1-203ENST00000594504 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.46□□□□□ -0.25
UPF1-203ENST00000594504 NUP210Q8TEM1 1887 aaPredicted RBP13.45□□□□□ -0.26
UPF1-203ENST00000594504 GOLGA8IPA6NC78 632 aa13.45□□□□□ -0.26
UPF1-203ENST00000594504 GOLGA8JA6NMD2 632 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms