RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 NOB1Q9ULX3 412 aaKnown RBP3.43□□□□□ -1.86
VRK3-204ENST00000593912 EXOC6BQ9Y2D4 811 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 IPPQ9Y573 584 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 ACANP16112 2415 aa3.43□□□□□ -1.86
VRK3-204ENST00000593912 OBSL1O75147 1896 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 COL27A1Q8IZC6 1860 aaPredicted RBP3.42□□□□□ -1.86
VRK3-204ENST00000593912 ZNF106Q9H2Y7 1883 aaKnown RBP3.42□□□□□ -1.86
VRK3-204ENST00000593912 IGKV6D-21A0A0A0MT36 114 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 WDR64B1ANS9 1081 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 BCAT2O15382 392 aaPredicted RBP3.42□□□□□ -1.86
VRK3-204ENST00000593912 FOXP2O15409 715 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 SYNCRIPO60506 623 aaKnown RBP3.42□□□□□ -1.86
VRK3-204ENST00000593912 NDUFS2O75306 463 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 ABLIM3O94929 683 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 ATG7O95352 703 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 PARP1P09874 1014 aaKnown RBP3.42□□□□□ -1.86
VRK3-204ENST00000593912 RARGP13631 454 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 ATF2P15336 505 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 WT1P19544 449 aaPredicted RBP3.42□□□□□ -1.86
VRK3-204ENST00000593912 AKAP5P24588 427 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 TMOD1P28289 359 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 HOXA11P31270 313 aaPredicted RBP3.42□□□□□ -1.86
VRK3-204ENST00000593912 OPRD1P41143 372 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 WASP42768 502 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 CCT8P50990 548 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 INHBCP55103 352 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 ST3GAL1Q11201 340 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 TGIF1Q15583 401 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 SGO2Q562F6 1265 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 C3orf38Q5JPI3 329 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 WDR45BQ5MNZ6 344 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 PRAMEF14Q5SWL7 426 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 TSHZ3Q63HK5 1081 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 SWSAP1Q6NVH7 229 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 IL27RAQ6UWB1 636 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 ABHD15Q6UXT9 468 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 RTL10Q7L3V2 364 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 TAOK1Q7L7X3 1001 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 CATIPQ7Z7H3 387 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 PRIMA1Q86XR5 153 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 FAM114A1Q8IWE2 563 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 TCEAL8Q8IYN2 117 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 EID2Q8N6I1 236 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 ZNF461Q8TAF7 563 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 TCTN2Q96GX1 697 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 TMEM87BQ96K49 555 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 GPR88Q9GZN0 384 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 DNAJC25Q9H1X3 360 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 CXCL16Q9H2A7 254 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 TMEM245Q9H330 911 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 NXF3Q9H4D5 531 aaKnown RBP3.42□□□□□ -1.86
VRK3-204ENST00000593912 GSX1Q9H4S2 264 aaPredicted RBP3.42□□□□□ -1.86
VRK3-204ENST00000593912 ECT2Q9H8V3 914 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 POLR1BQ9H9Y6 1135 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 CBX8Q9HC52 389 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 ZSWIM6Q9HCJ5 1215 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 ZNF302Q9NR11 478 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 AGPAT5Q9NUQ2 364 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 CUEDC1Q9NWM3 386 aaPredicted RBP3.42□□□□□ -1.86
VRK3-204ENST00000593912 THG1LQ9NWX6 298 aaKnown RBP3.42□□□□□ -1.86
VRK3-204ENST00000593912 OBP2AQ9NY56 170 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 EIF2B4Q9UI10 523 aaKnown RBP3.42□□□□□ -1.86
VRK3-204ENST00000593912 SATB2Q9UPW6 733 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 NOP58Q9Y2X3 529 aaKnown RBP3.42□□□□□ -1.86
VRK3-204ENST00000593912 UBIAD1Q9Y5Z9 338 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 SHANK1Q9Y566 2161 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 MYOFQ9NZM1 2061 aa3.42□□□□□ -1.86
VRK3-204ENST00000593912 E2F8A0AVK6 867 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 ZBTB5O15062 677 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 MAGEB2O15479 319 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 HNRNPRO43390 633 aaKnown RBP3.41□□□□□ -1.86
VRK3-204ENST00000593912 ORC4O43929 436 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 PCDHGA12O60330 932 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 DDAH2O95865 285 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 C1SP09871 688 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 NCAM1P13591 858 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 FGFR3P22607 806 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 GABRR2P28476 465 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 BRCC3P46736 316 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 LSSP48449 732 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 SLC26A2P50443 739 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 AMPD2Q01433 879 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 KCNAB2Q13303 367 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 INF2Q27J81 1249 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 SMTNL2Q2TAL5 461 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 EIF2S3LQ2VIR3 472 aaKnown RBP3.41□□□□□ -1.86
VRK3-204ENST00000593912 CCDC184Q52MB2 194 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 ASPRV1Q53RT3 343 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 DCAF6Q58WW2 860 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 DCAF12L1Q5VU92 463 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 FAM160B1Q5W0V3 765 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 ZSCAN25Q6NSZ9 544 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 FOXR1Q6PIV2 292 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 RSRC2Q7L4I2 434 aaKnown RBP3.41□□□□□ -1.86
VRK3-204ENST00000593912 VASH2Q86V25 355 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 LSMEM2Q8N112 164 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 CPA6Q8N4T0 437 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 SAMD3Q8N6K7 520 aa3.41□□□□□ -1.86
VRK3-204ENST00000593912 ENAHQ8N8S7 591 aaPredicted RBP3.41□□□□□ -1.86
VRK3-204ENST00000593912 PNMA1Q8ND90 353 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms