RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 HCFC1R1Q9NWW0 138 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 DNMT3BQ9UBC3 853 aaKnown RBP16.42■□□□□ 0.22
TRIM47-206ENST00000592942 SLC27A5Q9Y2P5 690 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 R3HCC1Q9Y3T6 440 aaKnown RBP16.42■□□□□ 0.22
TRIM47-206ENST00000592942 INSL5Q9Y5Q6 135 aa16.42■□□□□ 0.22
TRIM47-206ENST00000592942 BICDL2A1A5D9 508 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 MYBPHLA2RUH7 354 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 SPDYE4A6NLX3 237 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 GOLGA6L22H0YM25 854 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 PRRG1O14668 218 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 ATP2C2O75185 946 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 ASS1P00966 412 aaKnown RBP16.41■□□□□ 0.22
TRIM47-206ENST00000592942 LHX1P48742 406 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 CDH8P55286 799 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 NLRP12P59046 1061 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 NTHL1P78549 312 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 SLC39A12Q504Y0 691 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 SPOPLQ6IQ16 392 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 FAM171BQ6P995 826 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 POTEHQ6S545 545 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 GRASPQ7Z6J2 395 aaPredicted RBP16.41■□□□□ 0.22
TRIM47-206ENST00000592942 FRMD5Q7Z6J6 570 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 SLC35C1Q96A29 364 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 MMS19Q96T76 1030 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 PI4K2AQ9BTU6 479 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 SRRTQ9BXP5 876 aaKnown RBP16.41■□□□□ 0.22
TRIM47-206ENST00000592942 APOBEC3GQ9HC16 384 aaKnown RBP16.41■□□□□ 0.22
TRIM47-206ENST00000592942 CEP72Q9P209 647 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 NXF1Q9UBU9 619 aaKnown RBP16.41■□□□□ 0.22
TRIM47-206ENST00000592942 RWDD2AQ9UIY3 292 aa16.41■□□□□ 0.22
TRIM47-206ENST00000592942 C2CD4DB7Z1M9 353 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 MARSP56192 900 aaKnown RBP16.4■□□□□ 0.22
TRIM47-206ENST00000592942 ZNF699Q32M78 642 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 DPCR1Q3MIW9 517 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 CBWD6Q4V339 395 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 INTS6LQ5JSJ4 861 aaKnown RBP16.4■□□□□ 0.22
TRIM47-206ENST00000592942 CBWD3Q5JTY5 395 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 CBWD5Q5RIA9 395 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 KRT39Q6A163 491 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 IRF2BP1Q8IU81 584 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 FAM122AQ96E09 287 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 DNAJC25Q9H1X3 360 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 MMRN2Q9H8L6 949 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 PIDD1Q9HB75 910 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 CRTAC1Q9NQ79 661 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 HSFX1Q9UBD0 423 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 ARMCX3Q9UH62 379 aaPredicted RBP16.4■□□□□ 0.22
TRIM47-206ENST00000592942 GTF3C4Q9UKN8 822 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 USTQ9Y2C2 406 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 COQ4Q9Y3A0 265 aa16.4■□□□□ 0.22
TRIM47-206ENST00000592942 DENND4AQ7Z401 1863 aa16.39■□□□□ 0.22
TRIM47-206ENST00000592942 NRG2O14511 850 aaPredicted RBP16.39■□□□□ 0.21
TRIM47-206ENST00000592942 SOAT2O75908 522 aa16.39■□□□□ 0.21
TRIM47-206ENST00000592942 PDGFRBP09619 1106 aa16.39■□□□□ 0.21
TRIM47-206ENST00000592942 SP100P23497 879 aaPredicted RBP16.39■□□□□ 0.21
TRIM47-206ENST00000592942 GNL1P36915 607 aaPredicted RBP16.39■□□□□ 0.21
TRIM47-206ENST00000592942 MYL7Q01449 175 aa16.39■□□□□ 0.21
TRIM47-206ENST00000592942 TWF1Q12792 350 aa16.39■□□□□ 0.21
TRIM47-206ENST00000592942 SMARCB1Q12824 385 aa16.39■□□□□ 0.21
TRIM47-206ENST00000592942 ZNF667Q5HYK9 610 aa16.39■□□□□ 0.21
TRIM47-206ENST00000592942 DCP1BQ8IZD4 617 aaKnown RBP16.39■□□□□ 0.21
TRIM47-206ENST00000592942 TAF4BQ92750 862 aa16.39■□□□□ 0.21
TRIM47-206ENST00000592942 MYADMQ96S97 322 aa16.39■□□□□ 0.21
TRIM47-206ENST00000592942 LPIN3Q9BQK8 851 aa16.39■□□□□ 0.21
TRIM47-206ENST00000592942 LRRC3Q9BY71 257 aa16.39■□□□□ 0.21
TRIM47-206ENST00000592942 SMYD3Q9H7B4 428 aa16.39■□□□□ 0.21
TRIM47-206ENST00000592942 METTL14Q9HCE5 456 aaKnown RBP16.39■□□□□ 0.21
TRIM47-206ENST00000592942 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.39■□□□□ 0.21
TRIM47-206ENST00000592942 NCOR1O75376 2440 aa16.39■□□□□ 0.21
TRIM47-206ENST00000592942 CLUHO75153 1309 aa16.39■□□□□ 0.21
TRIM47-206ENST00000592942 XYLBO75191 536 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 LRG1P02750 347 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 HAPLN1P10915 354 aaPredicted RBP16.38■□□□□ 0.21
TRIM47-206ENST00000592942 PTPN2P17706 415 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 PCSK1P29120 753 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 PIK3CAP42336 1068 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 ASPAP45381 313 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 RAP1GAPP47736 663 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 TNNC1P63316 161 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 TSPY1Q01534 308 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 RNF135Q8IUD6 432 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 TRIM59Q8IWR1 403 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 HS6ST3Q8IZP7 471 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 C2orf15Q8WU43 125 aaKnown RBP16.38■□□□□ 0.21
TRIM47-206ENST00000592942 BCO2Q9BYV7 579 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 DPEP3Q9H4B8 488 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 AVENQ9NQS1 362 aaPredicted RBP16.38■□□□□ 0.21
TRIM47-206ENST00000592942 RAB20Q9NX57 234 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 TMEM63CQ9P1W3 806 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 CDH9Q9ULB4 789 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 YIPF1Q9Y548 306 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 MYO10Q9HD67 2058 aa16.38■□□□□ 0.21
TRIM47-206ENST00000592942 PMM2O15305 246 aa16.37■□□□□ 0.21
TRIM47-206ENST00000592942 MOSPD3O75425 235 aa16.37■□□□□ 0.21
TRIM47-206ENST00000592942 MBD3O95983 291 aa16.37■□□□□ 0.21
TRIM47-206ENST00000592942 RHOP08100 348 aa16.37■□□□□ 0.21
TRIM47-206ENST00000592942 ATF6P18850 670 aa16.37■□□□□ 0.21
TRIM47-206ENST00000592942 SSTR3P32745 418 aaPredicted RBP16.37■□□□□ 0.21
TRIM47-206ENST00000592942 CCR2P41597 374 aa16.37■□□□□ 0.21
TRIM47-206ENST00000592942 MXI1P50539 228 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms