RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 DENND4CQ5VZ89 1909 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 OBSL1O75147 1896 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 A0A087X0B3 334 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 SOBPA7XYQ1 873 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 DPYSL4O14531 572 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 SPTLC2O15270 562 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 ITGB3P05106 788 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 HAPLN1P10915 354 aaPredicted RBP14.3□□□□□ -0.12
APOC1-209ENST00000592885 DDX6P26196 483 aaKnown RBP eCLIP14.3□□□□□ -0.12
APOC1-209ENST00000592885 POLR2BP30876 1174 aaKnown RBP14.3□□□□□ -0.12
APOC1-209ENST00000592885 TFAMQ00059 246 aaKnown RBP14.3□□□□□ -0.12
APOC1-209ENST00000592885 PLCB2Q00722 1185 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 AMPD3Q01432 767 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 FZD5Q13467 585 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 SURF1Q15526 300 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 NFE2Q16621 373 aaPredicted RBP14.3□□□□□ -0.12
APOC1-209ENST00000592885 ARHGAP29Q52LW3 1261 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 CNNM4Q6P4Q7 775 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 ARID3BQ8IVW6 561 aaPredicted RBP14.3□□□□□ -0.12
APOC1-209ENST00000592885 GPD1LQ8N335 351 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 C1orf127Q8N9H9 656 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 ZBTB44Q8NCP5 570 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 FAM200AQ8TCP9 573 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 SNX21Q969T3 373 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 SAAL1Q96ER3 474 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 TASP1Q9H6P5 420 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 MAGEF1Q9HAY2 307 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 ABCB6Q9NP58 842 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 KBTBD4Q9NVX7 518 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 ZSCAN32Q9NX65 697 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 GDAP2Q9NXN4 497 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 PCDHB5Q9Y5E4 795 aa14.3□□□□□ -0.12
APOC1-209ENST00000592885 EIF3DO15371 548 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■□□□□ 9.1
APOC1-209ENST00000592885 HUS1O60921 280 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 LILRB5O75023 590 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 SOAT2O75908 522 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 MYL7Q01449 175 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 CSTF1Q05048 431 aaKnown RBP14.29□□□□□ -0.12
APOC1-209ENST00000592885 E2F4Q16254 413 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 TAF12Q16514 161 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 GPR158Q5T848 1215 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 TOP6BLQ8N6T0 577 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 PDILTQ8N807 584 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 SUMF1Q8NBK3 374 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 RUBCNQ92622 972 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 RSPRY1Q96DX4 576 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 LPIN3Q9BQK8 851 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 ACBD6Q9BR61 282 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 CBWD1Q9BRT8 395 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 IL21Q9HBE4 155 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 KIAA1586Q9HCI6 787 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 ABI2Q9NYB9 513 aaPredicted RBP14.29□□□□□ -0.12
APOC1-209ENST00000592885 NDRG2Q9UN36 371 aaKnown RBP14.29□□□□□ -0.12
APOC1-209ENST00000592885 AGAP1Q9UPQ3 857 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 UBE4BO95155 1302 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 F5P12259 2224 aa14.29□□□□□ -0.12
APOC1-209ENST00000592885 CFAP54Q96N23 3096 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 VPS13AQ96RL7 3174 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 CUTAO60888 179 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 TMEM191BP0C7N4 346 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 CCR3P51677 355 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 NRLP54845 237 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 WNT7BP56706 349 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 RBP5P82980 135 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 MTAPQ13126 283 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 LRRC32Q14392 662 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 OTOGLQ3ZCN5 2332 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 INTS6LQ5JSJ4 861 aaKnown RBP14.28□□□□□ -0.12
APOC1-209ENST00000592885 STXBP5Q5T5C0 1151 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 ERMP1Q7Z2K6 904 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 LRRTM3Q86VH5 581 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 RALGPS2Q86X27 583 aaPredicted RBP14.28□□□□□ -0.12
APOC1-209ENST00000592885 PDCL2Q8N4E4 241 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 IQUBQ8NA54 791 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 CXorf38Q8TB03 319 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 BPIFB1Q8TDL5 484 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 ATRIPQ8WXE1 791 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 ANKRD36BP1Q96IX9 119 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 FGFBP2Q9BYJ0 223 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 TRIM9Q9C026 710 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 EPC1Q9H2F5 836 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 KIF9Q9HAQ2 790 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 UXTQ9UBK9 157 aaPredicted RBP14.28□□□□□ -0.12
APOC1-209ENST00000592885 L1RE1Q9UN81 338 aa14.28□□□□□ -0.12
APOC1-209ENST00000592885 R3HCC1Q9Y3T6 440 aaKnown RBP14.28□□□□□ -0.12
APOC1-209ENST00000592885 MYBPHLA2RUH7 354 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 PRPF6O94906 941 aaKnown RBP14.27□□□□□ -0.13
APOC1-209ENST00000592885 CSH1P0DML2 217 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 CSH2P0DML3 217 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 PCSK1P29120 753 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 ID4P47928 161 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 LHX1P48742 406 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 KPNA1P52294 538 aaPredicted RBP14.27□□□□□ -0.13
APOC1-209ENST00000592885 SNRPFP62306 86 aaKnown RBP14.27□□□□□ -0.13
APOC1-209ENST00000592885 RPL10AP62906 217 aaKnown RBP14.27□□□□□ -0.13
APOC1-209ENST00000592885 BFSP1Q12934 665 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 MYO1EQ12965 1108 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 DPH6Q7L8W6 267 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 CSGALNACT2Q8N6G5 542 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 CELF5Q8N6W0 485 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms