RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 TMEM253P0C7T8 217 aa24.21■■□□□ 1.47
SPHK1-210ENST00000592299 LMO2P25791 158 aa24.21■■□□□ 1.47
SPHK1-210ENST00000592299 NSFP46459 744 aaKnown RBP24.21■■□□□ 1.47
SPHK1-210ENST00000592299 LIMS2Q7Z4I7 341 aa24.21■■□□□ 1.47
SPHK1-210ENST00000592299 COLGALT2Q8IYK4 626 aa24.21■■□□□ 1.47
SPHK1-210ENST00000592299 SLC35F6Q8N357 371 aa24.21■■□□□ 1.47
SPHK1-210ENST00000592299 DNAJB4Q9UDY4 337 aa24.21■■□□□ 1.47
SPHK1-210ENST00000592299 KIAA1257Q9ULG3 409 aa24.21■■□□□ 1.47
SPHK1-210ENST00000592299 PCDHGC3Q9UN70 934 aa24.21■■□□□ 1.47
SPHK1-210ENST00000592299 CEP83Q9Y592 693 aa24.21■■□□□ 1.47
SPHK1-210ENST00000592299 TIMM13Q9Y5L4 95 aaPredicted RBP24.21■■□□□ 1.47
SPHK1-210ENST00000592299 TBKBP1A7MCY6 615 aa24.2■■□□□ 1.46
SPHK1-210ENST00000592299 NOP2P46087 812 aaKnown RBP24.2■■□□□ 1.46
SPHK1-210ENST00000592299 BRCC3P46736 316 aa24.2■■□□□ 1.46
SPHK1-210ENST00000592299 NOMO3P69849 1222 aa24.2■■□□□ 1.46
SPHK1-210ENST00000592299 C12orf29Q8N999 325 aa24.2■■□□□ 1.46
SPHK1-210ENST00000592299 KIF18AQ8NI77 898 aa24.2■■□□□ 1.46
SPHK1-210ENST00000592299 DPEP3Q9H4B8 488 aa24.2■■□□□ 1.46
SPHK1-210ENST00000592299 STXBP5LQ9Y2K9 1186 aa24.2■■□□□ 1.46
SPHK1-210ENST00000592299 ABHD14A-ACY1A0A1B0GW23 586 aa24.19■■□□□ 1.46
SPHK1-210ENST00000592299 F8W810 466 aa24.19■■□□□ 1.46
SPHK1-210ENST00000592299 KIF4AO95239 1232 aa24.19■■□□□ 1.46
SPHK1-210ENST00000592299 ACRP10323 421 aa24.19■■□□□ 1.46
SPHK1-210ENST00000592299 WARSP23381 471 aaKnown RBP24.19■■□□□ 1.46
SPHK1-210ENST00000592299 AARSP49588 968 aaKnown RBP eCLIP24.19■■□□□ 1.46
SPHK1-210ENST00000592299 CENPCQ03188 943 aa24.19■■□□□ 1.46
SPHK1-210ENST00000592299 NOX5Q96PH1 765 aa24.19■■□□□ 1.46
SPHK1-210ENST00000592299 DNAI2Q9GZS0 605 aa24.19■■□□□ 1.46
SPHK1-210ENST00000592299 BTNL10A8MVZ5 291 aa24.19■■□□□ 1.46
SPHK1-210ENST00000592299 ITGB1P05556 798 aa24.19■■□□□ 1.46
SPHK1-210ENST00000592299 CASQ1P31415 396 aa24.19■■□□□ 1.46
SPHK1-210ENST00000592299 GPC5P78333 572 aa24.19■■□□□ 1.46
SPHK1-210ENST00000592299 OSTM1Q86WC4 334 aa24.19■■□□□ 1.46
SPHK1-210ENST00000592299 TMEM86AQ8N2M4 240 aa24.19■■□□□ 1.46
SPHK1-210ENST00000592299 RNF10Q8N5U6 811 aaKnown RBP24.19■■□□□ 1.46
SPHK1-210ENST00000592299 TMEM35BQ8NCS4 154 aa24.19■■□□□ 1.46
SPHK1-210ENST00000592299 PRG3Q9Y2Y8 225 aaPredicted RBP24.19■■□□□ 1.46
SPHK1-210ENST00000592299 CAPN6Q9Y6Q1 641 aa24.19■■□□□ 1.46
SPHK1-210ENST00000592299 LSM8O95777 96 aaKnown RBP24.18■■□□□ 1.46
SPHK1-210ENST00000592299 ODC1P11926 461 aa24.18■■□□□ 1.46
SPHK1-210ENST00000592299 CNGA2Q16280 664 aa24.18■■□□□ 1.46
SPHK1-210ENST00000592299 DENND1BQ6P3S1 775 aa24.18■■□□□ 1.46
SPHK1-210ENST00000592299 CD300LGQ6UXG3 332 aa24.18■■□□□ 1.46
SPHK1-210ENST00000592299 C1orf131Q8NDD1 294 aaKnown RBP24.18■■□□□ 1.46
SPHK1-210ENST00000592299 ZNF653Q96CK0 615 aa24.18■■□□□ 1.46
SPHK1-210ENST00000592299 ARHGEF26Q96DR7 871 aa24.18■■□□□ 1.46
SPHK1-210ENST00000592299 TNIP3Q96KP6 325 aa24.18■■□□□ 1.46
SPHK1-210ENST00000592299 MRPL9Q9BYD2 267 aaKnown RBP24.18■■□□□ 1.46
SPHK1-210ENST00000592299 NRDE2Q9H7Z3 1164 aa24.18■■□□□ 1.46
SPHK1-210ENST00000592299 FAM49BQ9NUQ9 324 aa24.18■■□□□ 1.46
SPHK1-210ENST00000592299 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.18■■□□□ 1.46
SPHK1-210ENST00000592299 MYH10P35580 1976 aa24.18■■□□□ 1.46
SPHK1-210ENST00000592299 O00370 1275 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 MICAL2O94851 1124 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 PFKMP08237 780 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 FAM163BP0C2L3 166 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 PAX3P23760 479 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 RFFLQ8WZ73 363 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 ALS2CR12Q96Q35 445 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 DDX43Q9NXZ2 648 aaKnown RBP24.17■■□□□ 1.46
SPHK1-210ENST00000592299 A0A0A6YYK5 440 aaPredicted RBP24.17■■□□□ 1.46
SPHK1-210ENST00000592299 M0QYV0 167 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 GABRDO14764 452 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 ATMINO43313 823 aaPredicted RBP24.17■■□□□ 1.46
SPHK1-210ENST00000592299 LHX1P48742 406 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 C2CD6Q53TS8 623 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 PPP1R26Q5T8A7 1209 aaPredicted RBP24.17■■□□□ 1.46
SPHK1-210ENST00000592299 MCOLN2Q8IZK6 566 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 TRIM58Q8NG06 486 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 SLC35G2Q8TBE7 412 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 RSPH1Q8WYR4 309 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 LPIN3Q9BQK8 851 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 C11orf70Q9BRQ4 267 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 ZNF518BQ9C0D4 1074 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 HCSTQ9UBK5 93 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 TSPAN16Q9UKR8 245 aa24.17■■□□□ 1.46
SPHK1-210ENST00000592299 FANCGO15287 622 aa24.16■■□□□ 1.46
SPHK1-210ENST00000592299 AMHP03971 560 aa24.16■■□□□ 1.46
SPHK1-210ENST00000592299 ACAT1P24752 427 aaKnown RBP24.16■■□□□ 1.46
SPHK1-210ENST00000592299 STILQ15468 1287 aa24.16■■□□□ 1.46
SPHK1-210ENST00000592299 IFI16Q16666 785 aaKnown RBP24.16■■□□□ 1.46
SPHK1-210ENST00000592299 PPP1R2P3Q6NXS1 205 aa24.16■■□□□ 1.46
SPHK1-210ENST00000592299 METTL23Q86XA0 190 aa24.16■■□□□ 1.46
SPHK1-210ENST00000592299 CRYBG2Q8N1P7 616 aa24.16■■□□□ 1.46
SPHK1-210ENST00000592299 LHX5Q9H2C1 402 aa24.16■■□□□ 1.46
SPHK1-210ENST00000592299 OSGEPQ9NPF4 335 aa24.16■■□□□ 1.46
SPHK1-210ENST00000592299 ADAM22Q9P0K1 906 aa24.16■■□□□ 1.46
SPHK1-210ENST00000592299 CHORDC1Q9UHD1 332 aaPredicted RBP24.16■■□□□ 1.46
SPHK1-210ENST00000592299 FNDC1Q4ZHG4 1894 aaPredicted RBP24.16■■□□□ 1.46
SPHK1-210ENST00000592299 NCANO14594 1321 aa24.15■■□□□ 1.46
SPHK1-210ENST00000592299 ALPK3Q96L96 1907 aa24.15■■□□□ 1.46
SPHK1-210ENST00000592299 M0QZQ0 153 aa24.15■■□□□ 1.46
SPHK1-210ENST00000592299 ALDH2P05091 517 aa24.15■■□□□ 1.46
SPHK1-210ENST00000592299 PSMC1P62191 440 aaKnown RBP24.15■■□□□ 1.46
SPHK1-210ENST00000592299 LCLAT1Q6UWP7 414 aa24.15■■□□□ 1.46
SPHK1-210ENST00000592299 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.15■■□□□ 1.46
SPHK1-210ENST00000592299 C7orf61Q8IZ16 206 aa24.15■■□□□ 1.46
SPHK1-210ENST00000592299 LRRC43Q8N309 656 aa24.15■■□□□ 1.46
SPHK1-210ENST00000592299 WDTC1Q8N5D0 677 aa24.15■■□□□ 1.46
SPHK1-210ENST00000592299 UBA3Q8TBC4 463 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms