RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 HS3ST6Q96QI5 342 aa10.94□□□□□ -0.66
VMP1-214ENST00000592106 LRRC3Q9BY71 257 aa10.94□□□□□ -0.66
VMP1-214ENST00000592106 LRRC27Q9C0I9 530 aa10.94□□□□□ -0.66
VMP1-214ENST00000592106 ZCWPW1Q9H0M4 648 aa10.94□□□□□ -0.66
VMP1-214ENST00000592106 DNAJC25Q9H1X3 360 aa10.94□□□□□ -0.66
VMP1-214ENST00000592106 ZSCAN16Q9H4T2 348 aaPredicted RBP10.94□□□□□ -0.66
VMP1-214ENST00000592106 TMEM206Q9H813 350 aa10.94□□□□□ -0.66
VMP1-214ENST00000592106 OLFML3Q9NRN5 406 aa10.94□□□□□ -0.66
VMP1-214ENST00000592106 THG1LQ9NWX6 298 aaKnown RBP10.94□□□□□ -0.66
VMP1-214ENST00000592106 FBXO2Q9UK22 296 aaPredicted RBP10.94□□□□□ -0.66
VMP1-214ENST00000592106 GMEB2Q9UKD1 530 aa10.94□□□□□ -0.66
VMP1-214ENST00000592106 SMG5Q9UPR3 1016 aaKnown RBP10.94□□□□□ -0.66
VMP1-214ENST00000592106 SLC27A5Q9Y2P5 690 aa10.94□□□□□ -0.66
VMP1-214ENST00000592106 CLIC4Q9Y696 253 aa10.94□□□□□ -0.66
VMP1-214ENST00000592106 MORC2Q9Y6X9 1032 aaPredicted RBP10.94□□□□□ -0.66
VMP1-214ENST00000592106 COL4A3Q01955 1670 aa10.94□□□□□ -0.66
VMP1-214ENST00000592106 TICRRQ7Z2Z1 1910 aa10.94□□□□□ -0.66
VMP1-214ENST00000592106 NUP210Q8TEM1 1887 aaPredicted RBP10.93□□□□□ -0.66
VMP1-214ENST00000592106 COL4A2P08572 1712 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 KPNA7A9QM74 516 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 KIAA0391O15091 583 aaKnown RBP10.93□□□□□ -0.66
VMP1-214ENST00000592106 TMEM191BP0C7N4 346 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 SDHBP21912 280 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 GARTP22102 1010 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 CCNE1P24864 410 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 DDX6P26196 483 aaKnown RBP eCLIP10.93□□□□□ -0.66
VMP1-214ENST00000592106 TFAMQ00059 246 aaKnown RBP10.93□□□□□ -0.66
VMP1-214ENST00000592106 FCHO2Q0JRZ9 810 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 MTAPQ13126 283 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 RESTQ13127 1097 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 PUM1Q14671 1186 aaKnown RBP eCLIP10.93□□□□□ -0.66
VMP1-214ENST00000592106 NFE2Q16621 373 aaPredicted RBP10.93□□□□□ -0.66
VMP1-214ENST00000592106 DGKKQ5KSL6 1271 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 ARID3BQ8IVW6 561 aaPredicted RBP10.93□□□□□ -0.66
VMP1-214ENST00000592106 CCDC65Q8IXS2 484 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 TMEM130Q8N3G9 435 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 TTC9BQ8N6N2 239 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 LRRC52Q8N7C0 313 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 SUMF1Q8NBK3 374 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 ZBTB44Q8NCP5 570 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 OR10T2Q8NGX3 314 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 BPIFB1Q8TDL5 484 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 EXOC4Q96A65 974 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 INTS4Q96HW7 963 aaKnown RBP10.93□□□□□ -0.66
VMP1-214ENST00000592106 TMEM209Q96SK2 561 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 FAM213AQ9BRX8 229 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 EPC1Q9H2F5 836 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 CRISPLD1Q9H336 500 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 TASP1Q9H6P5 420 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 LMAN1LQ9HAT1 526 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 ABI2Q9NYB9 513 aaPredicted RBP10.93□□□□□ -0.66
VMP1-214ENST00000592106 RBAKQ9NYW8 714 aaPredicted RBP10.93□□□□□ -0.66
VMP1-214ENST00000592106 PCDHB5Q9Y5E4 795 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 TCHHQ07283 1943 aa10.93□□□□□ -0.66
VMP1-214ENST00000592106 ANK1P16157 1881 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 MYMKA6NI61 221 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 TISP43B9A030 160 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 HUS1O60921 280 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 LILRB5O75023 590 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 SOAT2O75908 522 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 CSH1P0DML2 217 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 CSH2P0DML3 217 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 SYT1P21579 422 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 WEE1P30291 646 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 CYP4F8P98187 520 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 MYL7Q01449 175 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 CEBPZQ03701 1054 aaKnown RBP10.92□□□□□ -0.66
VMP1-214ENST00000592106 WSCD1Q658N2 575 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 GAREM2Q75VX8 874 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 DGLUCYQ7Z3D6 616 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 RALGPS2Q86X27 583 aaPredicted RBP10.92□□□□□ -0.66
VMP1-214ENST00000592106 EFCAB13Q8IY85 973 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 TMEM86AQ8N2M4 240 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 SPATA18Q8TC71 538 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 NOC3LQ8WTT2 800 aaKnown RBP10.92□□□□□ -0.66
VMP1-214ENST00000592106 NELL1Q92832 810 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 ANKRD36BP1Q96IX9 119 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 CLIC6Q96NY7 704 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 EPAS1Q99814 870 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 LPIN3Q9BQK8 851 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 KIF9Q9HAQ2 790 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 TBC1D7Q9P0N9 293 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 UXTQ9UBK9 157 aaPredicted RBP10.92□□□□□ -0.66
VMP1-214ENST00000592106 ITGA11Q9UKX5 1188 aa10.92□□□□□ -0.66
VMP1-214ENST00000592106 MYBPHLA2RUH7 354 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 SLC38A8A6NNN8 435 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 SPECC1L-ADORA2AF8WAN1 911 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 ARNTLO00327 626 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 NRG2O14511 850 aaPredicted RBP10.91□□□□□ -0.66
VMP1-214ENST00000592106 EXTL3O43909 919 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 ITGB3P05106 788 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 HAPLN1P10915 354 aaPredicted RBP10.91□□□□□ -0.66
VMP1-214ENST00000592106 ATF6P18850 670 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 PCSK1P29120 753 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 POLR2BP30876 1174 aaKnown RBP10.91□□□□□ -0.66
VMP1-214ENST00000592106 AVPR1AP37288 418 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 CXCL12P48061 93 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 RPL10AP62906 217 aaKnown RBP10.91□□□□□ -0.66
VMP1-214ENST00000592106 AMPD2Q01433 879 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 BFSP1Q12934 665 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms