RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 IRF7Q92985 503 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 PORCNQ9H237 461 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 KLHL11Q9NVR0 708 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 BFARQ9NZS9 450 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 USP20Q9Y2K6 914 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 A0A1W2PQ45 241 aaPredicted RBP12□□□□□ -0.49
SEH1L-208ENST00000590843 A0A1W2PQY0 241 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 SPATA31C2B4DYI2 1134 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 ARP10275 920 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 FSHRP23945 695 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 MAPK8P45983 427 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 MTMR3Q13615 1198 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 TAF1BQ53T94 588 aaPredicted RBP12□□□□□ -0.49
SEH1L-208ENST00000590843 TTC19Q6DKK2 380 aaPredicted RBP12□□□□□ -0.49
SEH1L-208ENST00000590843 BTNL9Q6UXG8 535 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 PHOSPHO2Q8TCD6 241 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 MCOLN3Q8TDD5 553 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 PRRX2Q99811 253 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 NSUN3Q9H649 340 aaKnown RBP12□□□□□ -0.49
SEH1L-208ENST00000590843 TLR9Q9NR96 1032 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 PCDHA2Q9Y5H9 948 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 MTA2O94776 668 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 RPN2P04844 631 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 PTPN3P26045 913 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 RHOAP61586 193 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 TIGD7Q6NT04 549 aaPredicted RBP11.99□□□□□ -0.49
SEH1L-208ENST00000590843 MFN1Q8IWA4 741 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 C2orf15Q8WU43 125 aaKnown RBP11.99□□□□□ -0.49
SEH1L-208ENST00000590843 PAGE5Q96GU1 130 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 NAPGQ99747 312 aaPredicted RBP11.99□□□□□ -0.49
SEH1L-208ENST00000590843 TMEM175Q9BSA9 504 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 FAM105AQ9NUU6 356 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 GIMAP4Q9NUV9 329 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 THEGQ9P2T0 379 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 CNTNAP5Q8WYK1 1306 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 KIF20BQ96Q89 1820 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 EEF2KO00418 725 aaKnown RBP11.99□□□□□ -0.49
SEH1L-208ENST00000590843 IFRD1O00458 451 aaPredicted RBP11.99□□□□□ -0.49
SEH1L-208ENST00000590843 SERPING1P05155 500 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 KRT3P12035 628 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 SDHBP21912 280 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 DDX6P26196 483 aaKnown RBP eCLIP11.99□□□□□ -0.492e-6■□□□□ 8.3
SEH1L-208ENST00000590843 NPY2RP49146 381 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 USP39Q53GS9 565 aaKnown RBP11.99□□□□□ -0.49
SEH1L-208ENST00000590843 CCDC186Q7Z3E2 898 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 CATSPER3Q86XQ3 398 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 IFT20Q8IY31 132 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 LINC00301Q8NCQ3 95 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 IGDCC4Q8TDY8 1250 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 ANKS1AQ92625 1134 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 NDST4Q9H3R1 872 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 KRT82Q9NSB4 513 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 CNOT8Q9UFF9 292 aaKnown RBP11.99□□□□□ -0.49
SEH1L-208ENST00000590843 GGT7Q9UJ14 662 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 C3orf70A6NLC5 250 aaPredicted RBP11.99□□□□□ -0.49
SEH1L-208ENST00000590843 MAPK13O15264 365 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 HOXB8P17481 243 aaPredicted RBP11.99□□□□□ -0.49
SEH1L-208ENST00000590843 RGS4P49798 205 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 TPD52P55327 224 aaPredicted RBP11.99□□□□□ -0.49
SEH1L-208ENST00000590843 APBA1Q02410 837 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 SLC39A12Q504Y0 691 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 ZNF677Q86XU0 584 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 KCNK9Q9NPC2 374 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 ARHGEF28Q8N1W1 1705 aaKnown RBP11.99□□□□□ -0.49
SEH1L-208ENST00000590843 SYN3O14994 580 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 TTI1O43156 1089 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 SAT1P21673 171 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 SARSP49591 514 aaKnown RBP11.99□□□□□ -0.49
SEH1L-208ENST00000590843 TTLL9Q3SXZ7 439 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 CXorf40AQ8TE69 158 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 MORC4Q8TE76 937 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 BADQ92934 168 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 CCDC3Q9BQI4 270 aa11.99□□□□□ -0.49
SEH1L-208ENST00000590843 ITGAXP20702 1163 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 CDC25AP30304 524 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 HPDP32754 393 aaPredicted RBP11.98□□□□□ -0.49
SEH1L-208ENST00000590843 GRK3P35626 688 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 GRB14Q14449 540 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 FBXL19Q6PCT2 694 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 ZFPM1Q8IX07 1006 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 TSC1Q92574 1164 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 TMX1Q9H3N1 280 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 WDCPQ9H6R7 721 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 ECT2Q9H8V3 914 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.98□□□□□ -0.49
SEH1L-208ENST00000590843 MTMR6Q9Y217 621 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 KNDC1Q76NI1 1749 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 ARHGAP10A1A4S6 786 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 KRT15P19012 456 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 CDH8P55286 799 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 IRX4P78413 519 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 UBE3AQ05086 875 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 AARS2Q5JTZ9 985 aaKnown RBP11.98□□□□□ -0.49
SEH1L-208ENST00000590843 GPR158Q5T848 1215 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 LZTFL1Q9NQ48 299 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 FAM49BQ9NUQ9 324 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 VPS51Q9UID3 782 aa11.98□□□□□ -0.49
SEH1L-208ENST00000590843 BARX2Q9UMQ3 279 aaPredicted RBP11.98□□□□□ -0.49
SEH1L-208ENST00000590843 H2AFYO75367 372 aaKnown RBP11.98□□□□□ -0.49
SEH1L-208ENST00000590843 HLA-DRAP01903 254 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms