RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 C2CD6Q53TS8 623 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 ANKRD20A2Q5SQ80 823 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 ANKRD20A1Q5TYW2 823 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 ANKRD20A3Q5VUR7 823 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 DAB2IPQ5VWQ8 1189 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 SPOPLQ6IQ16 392 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 SWSAP1Q6NVH7 229 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 ADGRD1Q6QNK2 874 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 BZW1Q7L1Q6 419 aaKnown RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 ATP11CQ8NB49 1132 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 GLIS1Q8NBF1 620 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 SLC7A6OSQ96CW6 309 aaPredicted RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 THOC1Q96FV9 657 aaKnown RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 PORCNQ9H237 461 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 DHX33Q9H6R0 707 aaKnown RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 HOMER2Q9NSB8 354 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 SLC9A2Q9UBY0 812 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 SEPT9Q9UHD8 586 aaPredicted RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 GRID1Q9ULK0 1009 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 PCDHGC3Q9UN70 934 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 STK38LQ9Y2H1 464 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 LRRC42Q9Y546 428 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 NUB1Q9Y5A7 615 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 CTDP1Q9Y5B0 961 aaPredicted RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 IVNS1ABPQ9Y6Y0 642 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 ZNF541Q9H0D2 1346 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 POC1B-GALNT4F8VUJ3 575 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 VWA5AO00534 786 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 SPAG7O75391 227 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 ASS1P00966 412 aaKnown RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 IL1BP01584 269 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 SUPT20HL2P0C7V6 817 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 KRT10P13645 584 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 CA4P22748 312 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 EIF4BP23588 611 aaKnown RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 RPA3P35244 121 aaPredicted RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 SSR1P43307 286 aaKnown RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 ACTR2P61160 394 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 RPL7AP62424 266 aaKnown RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 NCOA4Q13772 614 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 BAATQ14032 418 aaPredicted RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 NAA25Q14CX7 972 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 FASTKD3Q14CZ7 662 aaKnown RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 SLC1A5Q15758 541 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 HIF1AQ16665 826 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 SUPT20HL1Q3ZLR7 823 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 HHATQ5VTY9 493 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 DNAJC24Q6P3W2 148 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 PRUNE1Q86TP1 453 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 PASD1Q8IV76 773 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 CCDC60Q8IWA6 550 aaPredicted RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 PPIL6Q8IXY8 311 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 TEX9Q8N6V9 391 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 TMEM35BQ8NCS4 154 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 NSUN6Q8TEA1 469 aaKnown RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 FNIP1Q8TF40 1166 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 FBXO41Q8TF61 875 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 ZNF75CPQ92670 426 aaPredicted RBP13.04□□□□□ -0.32
PDE4A-207ENST00000590407 FAM118BQ9BPY3 351 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 HAPLN2Q9GZV7 340 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 VPS11Q9H270 941 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 ACSS3Q9H6R3 686 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 VPS37BQ9H9H4 285 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 RNF146Q9NTX7 359 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 CYP39A1Q9NYL5 469 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 RABGEF1Q9UJ41 708 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 CLUHO75153 1309 aa13.04□□□□□ -0.32
PDE4A-207ENST00000590407 FER1L6Q2WGJ9 1857 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 C3orf70A6NLC5 250 aaPredicted RBP13.03□□□□□ -0.32
PDE4A-207ENST00000590407 SPATA31C2B4DYI2 1134 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 PI4K2BG5E9Z4 385 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 ABLIM1O14639 778 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 PEX11AO75192 247 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 RAD17O75943 681 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 FAM155BO75949 473 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 RGS20O76081 388 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 ATG7O95352 703 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 LMNAP02545 664 aaKnown RBP13.03□□□□□ -0.32
PDE4A-207ENST00000590407 ZSCAN5DPP0CG00 497 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 ACOT2P49753 483 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 ARL4CP56559 192 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 GPX6P59796 221 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 PDIA2Q13087 525 aaKnown RBP13.03□□□□□ -0.32
PDE4A-207ENST00000590407 ATP13A4Q4VNC1 1196 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 FYB2Q5VWT5 728 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 LMBRD2Q68DH5 695 aaPredicted RBP13.03□□□□□ -0.32
PDE4A-207ENST00000590407 BBS12Q6ZW61 710 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 BRSK2Q8IWQ3 736 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 ZBED8Q8IZ13 594 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 REPS2Q8NFH8 660 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 STK32AQ8WU08 396 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 MZB1Q8WU39 189 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 PAIP2Q9BPZ3 127 aaKnown RBP13.03□□□□□ -0.32
PDE4A-207ENST00000590407 IMPG2Q9BZV3 1241 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 KIAA1217Q5T5P2 1943 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 SSC5DA1L4H1 1573 aa13.03□□□□□ -0.32
PDE4A-207ENST00000590407 TROVE2P10155 538 aaKnown RBP eCLIP13.02□□□□□ -0.32
PDE4A-207ENST00000590407 ATF7P17544 494 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms