RNA–Protein interactions for RNA: ENST00000590388.5

TUBB6-208, Transcript of tubulin beta 6 class V, humanhuman

TSL 4

Gene TUBB6, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-208ENST00000590388 POLIQ9UNA4 740 aa13.38□□□□□ -0.27
TUBB6-208ENST00000590388 SORCS3Q9UPU3 1222 aa13.38□□□□□ -0.27
TUBB6-208ENST00000590388 GREB1Q4ZG55 1949 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 PSMA7O14818 248 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 CETN3O15182 167 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 SLC16A3O15427 465 aaKnown RBP13.37□□□□□ -0.27
TUBB6-208ENST00000590388 GPR37L1O60883 481 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 MICAL2O94851 1124 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 RHOP08100 348 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 LAMP2P13473 410 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 KRT13P13646 458 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 CCNE1P24864 410 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 GBP2P32456 591 aaPredicted RBP13.37□□□□□ -0.27
TUBB6-208ENST00000590388 TUFMP49411 452 aaKnown RBP13.37□□□□□ -0.27
TUBB6-208ENST00000590388 PMS1P54277 932 aaKnown RBP13.37□□□□□ -0.27
TUBB6-208ENST00000590388 NTHL1P78549 312 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 ZXDAP98168 799 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 TWF1Q12792 350 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 BIRC3Q13489 604 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 STIM1Q13586 685 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 WDR72Q3MJ13 1102 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 PRSS36Q5K4E3 855 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 ANKRD40Q6AI12 368 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 SV2AQ7L0J3 742 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 GET4Q7L5D6 327 aaPredicted RBP13.37□□□□□ -0.27
TUBB6-208ENST00000590388 ELMOD1Q8N336 334 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 TTC9BQ8N6N2 239 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 LEMD2Q8NC56 503 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 TAF4BQ92750 862 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 FGF13Q92913 245 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 TSG101Q99816 390 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 DNAJC25Q9H1X3 360 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 ABCB6Q9NP58 842 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 KIAA1468Q9P260 1216 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 CDH7Q9ULB5 785 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 ASB3Q9Y575 518 aa13.37□□□□□ -0.27
TUBB6-208ENST00000590388 OBSL1O75147 1896 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 PPP1R3GB7ZBB8 358 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 ANHXE9PGG2 379 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 PHACTR2O75167 634 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 ASS1P00966 412 aaKnown RBP13.36□□□□□ -0.27
TUBB6-208ENST00000590388 EPB41P11171 864 aaKnown RBP13.36□□□□□ -0.27
TUBB6-208ENST00000590388 CD44P16070 742 aaKnown RBP13.36□□□□□ -0.27
TUBB6-208ENST00000590388 GTF2H1P32780 548 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 ALDH1A3P47895 512 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 TNNC1P63316 161 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 PPP3CAQ08209 521 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 SLC5A9Q2M3M2 681 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 ZNF699Q32M78 642 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 CFAP221Q4G0U5 840 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 IQCEQ6IPM2 695 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 TTI2Q6NXR4 508 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 FAM171BQ6P995 826 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 NPAS3Q8IXF0 933 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 UBALD2Q8IYN6 164 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 ITFG1Q8TB96 612 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 FUBP3Q96I24 572 aaKnown RBP eCLIP13.36□□□□□ -0.27
TUBB6-208ENST00000590388 ZNF512Q96ME7 567 aaPredicted RBP13.36□□□□□ -0.27
TUBB6-208ENST00000590388 LRRC3Q9BY71 257 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 KCNK12Q9HB15 430 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 TMEM8AQ9HCN3 771 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 TMLHEQ9NVH6 421 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 GDE1Q9NZC3 331 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 LIMD1Q9UGP4 676 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 CDH9Q9ULB4 789 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 PCDHB5Q9Y5E4 795 aa13.36□□□□□ -0.27
TUBB6-208ENST00000590388 NUP210Q8TEM1 1887 aaPredicted RBP13.36□□□□□ -0.27
TUBB6-208ENST00000590388 TRIM49BA6NDI0 452 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 ZNF197O14709 1029 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 ASGR2P07307 311 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 TRIM49P0CI25 452 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 TRIM49CP0CI26 452 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 HAPLN1P10915 354 aaPredicted RBP13.35□□□□□ -0.27
TUBB6-208ENST00000590388 ATF6P18850 670 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 ACAT1P24752 427 aaKnown RBP13.35□□□□□ -0.27
TUBB6-208ENST00000590388 EPHB3P54753 998 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 MTMR3Q13615 1198 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 HTR4Q13639 388 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 SGSM1Q2NKQ1 1148 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 ZNF667Q5HYK9 610 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 PDZD4Q76G19 769 aaPredicted RBP13.35□□□□□ -0.27
TUBB6-208ENST00000590388 TMC8Q8IU68 726 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 PSMG2Q969U7 264 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 CEP63Q96MT8 703 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 MMS19Q96T76 1030 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 SYT15Q9BQS2 421 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 CORO1BQ9BR76 489 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 ASAH2Q9NR71 780 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 LMBRD1Q9NUN5 540 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 SLC27A5Q9Y2P5 690 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 MRPS23Q9Y3D9 190 aaKnown RBP13.35□□□□□ -0.27
TUBB6-208ENST00000590388 NME7Q9Y5B8 376 aa13.35□□□□□ -0.27
TUBB6-208ENST00000590388 MYBPHLA2RUH7 354 aa13.34□□□□□ -0.27
TUBB6-208ENST00000590388 PRR33A8MZF0 331 aa13.34□□□□□ -0.27
TUBB6-208ENST00000590388 HCRTO43612 131 aa13.34□□□□□ -0.27
TUBB6-208ENST00000590388 HLA-DRAP01903 254 aa13.34□□□□□ -0.27
TUBB6-208ENST00000590388 P4HA1P13674 534 aa13.34□□□□□ -0.27
TUBB6-208ENST00000590388 LMO2P25791 158 aa13.34□□□□□ -0.27
TUBB6-208ENST00000590388 CCR2P41597 374 aa13.34□□□□□ -0.27
TUBB6-208ENST00000590388 GCLMP48507 274 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms