RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 TMEM150AQ86TG1 271 aa19.42■□□□□ 0.7
H3F3B-209ENST00000589949 METTL23Q86XA0 190 aa19.42■□□□□ 0.7
H3F3B-209ENST00000589949 PDCL2Q8N4E4 241 aa19.42■□□□□ 0.7
H3F3B-209ENST00000589949 SMG9Q9H0W8 520 aaKnown RBP19.42■□□□□ 0.7
H3F3B-209ENST00000589949 PDE11AQ9HCR9 933 aa19.42■□□□□ 0.7
H3F3B-209ENST00000589949 PRMT8Q9NR22 394 aaPredicted RBP19.42■□□□□ 0.7
H3F3B-209ENST00000589949 ABI2Q9NYB9 513 aaPredicted RBP19.42■□□□□ 0.7
H3F3B-209ENST00000589949 RBAKQ9NYW8 714 aaPredicted RBP19.42■□□□□ 0.7
H3F3B-209ENST00000589949 L1RE1Q9UN81 338 aa19.42■□□□□ 0.7
H3F3B-209ENST00000589949 AGAP1Q9UPQ3 857 aa19.42■□□□□ 0.7
H3F3B-209ENST00000589949 MRPS17Q9Y2R5 130 aaKnown RBP19.42■□□□□ 0.7
H3F3B-209ENST00000589949 PCDHB13Q9Y5F0 798 aa19.42■□□□□ 0.7
H3F3B-209ENST00000589949 PTPRJQ12913 1337 aa19.42■□□□□ 0.7
H3F3B-209ENST00000589949 TCHHQ07283 1943 aa19.41■□□□□ 0.7
H3F3B-209ENST00000589949 MAN2B1O00754 1011 aa19.41■□□□□ 0.7
H3F3B-209ENST00000589949 HMGA1P17096 107 aaKnown RBP19.41■□□□□ 0.7
H3F3B-209ENST00000589949 MAGEA9P43362 315 aa19.41■□□□□ 0.7
H3F3B-209ENST00000589949 TUFMP49411 452 aaKnown RBP19.41■□□□□ 0.7
H3F3B-209ENST00000589949 SV2CQ496J9 727 aa19.41■□□□□ 0.7
H3F3B-209ENST00000589949 ZC3H14Q6PJT7 736 aaKnown RBP19.41■□□□□ 0.7
H3F3B-209ENST00000589949 TXNDC11Q6PKC3 985 aa19.41■□□□□ 0.7
H3F3B-209ENST00000589949 SHC4Q6S5L8 630 aa19.41■□□□□ 0.7
H3F3B-209ENST00000589949 OSTM1Q86WC4 334 aa19.41■□□□□ 0.7
H3F3B-209ENST00000589949 NT5DC4Q86YG4 428 aa19.41■□□□□ 0.7
H3F3B-209ENST00000589949 SYCP3Q8IZU3 236 aa19.41■□□□□ 0.7
H3F3B-209ENST00000589949 ZBTB44Q8NCP5 570 aa19.41■□□□□ 0.7
H3F3B-209ENST00000589949 TTC8Q8TAM2 541 aa19.41■□□□□ 0.7
H3F3B-209ENST00000589949 PKMYT1Q99640 499 aa19.41■□□□□ 0.7
H3F3B-209ENST00000589949 SLC46A2Q9BY10 475 aa19.41■□□□□ 0.7
H3F3B-209ENST00000589949 CHRDQ9H2X0 955 aa19.41■□□□□ 0.7
H3F3B-209ENST00000589949 KBTBD4Q9NVX7 518 aa19.41■□□□□ 0.7
H3F3B-209ENST00000589949 SLC38A8A6NNN8 435 aa19.4■□□□□ 0.7
H3F3B-209ENST00000589949 SPTLC2O15270 562 aa19.4■□□□□ 0.7
H3F3B-209ENST00000589949 CHADO15335 359 aa19.4■□□□□ 0.7
H3F3B-209ENST00000589949 NCAM2O15394 837 aa19.4■□□□□ 0.7
H3F3B-209ENST00000589949 EXTL3O43909 919 aa19.4■□□□□ 0.7
H3F3B-209ENST00000589949 CHRNB1P11230 501 aa19.4■□□□□ 0.7
H3F3B-209ENST00000589949 STK38Q15208 465 aa19.4■□□□□ 0.7
H3F3B-209ENST00000589949 SDHAF4Q5VUM1 108 aa19.4■□□□□ 0.7
H3F3B-209ENST00000589949 FOXD4L5Q5VV16 416 aaPredicted RBP19.4■□□□□ 0.7
H3F3B-209ENST00000589949 LMBRD2Q68DH5 695 aaPredicted RBP19.4■□□□□ 0.7
H3F3B-209ENST00000589949 ITIH5Q86UX2 942 aa19.4■□□□□ 0.7
H3F3B-209ENST00000589949 THEM5Q8N1Q8 247 aa19.4■□□□□ 0.7
H3F3B-209ENST00000589949 CSGALNACT2Q8N6G5 542 aa19.4■□□□□ 0.7
H3F3B-209ENST00000589949 FAM200AQ8TCP9 573 aa19.4■□□□□ 0.7
H3F3B-209ENST00000589949 FOXD4L4Q8WXT5 416 aaPredicted RBP19.4■□□□□ 0.7
H3F3B-209ENST00000589949 MTMR12Q9C0I1 747 aa19.4■□□□□ 0.7
H3F3B-209ENST00000589949 LMAN1LQ9HAT1 526 aa19.4■□□□□ 0.7
H3F3B-209ENST00000589949 RBM12Q9NTZ6 932 aaKnown RBP19.4■□□□□ 0.7
H3F3B-209ENST00000589949 LILRB5O75023 590 aa19.39■□□□□ 0.69
H3F3B-209ENST00000589949 ACAT1P24752 427 aaKnown RBP19.39■□□□□ 0.69
H3F3B-209ENST00000589949 TNK2Q07912 1038 aa19.39■□□□□ 0.69
H3F3B-209ENST00000589949 ALCAMQ13740 583 aa19.39■□□□□ 0.69
H3F3B-209ENST00000589949 CBWD2Q8IUF1 395 aa19.39■□□□□ 0.69
H3F3B-209ENST00000589949 KIAA2013Q8IYS2 634 aa19.39■□□□□ 0.69
H3F3B-209ENST00000589949 OR5B17Q8NGF7 314 aa19.39■□□□□ 0.69
H3F3B-209ENST00000589949 RIN3Q8TB24 985 aa19.39■□□□□ 0.69
H3F3B-209ENST00000589949 SPPL2BQ8TCT7 592 aa19.39■□□□□ 0.69
H3F3B-209ENST00000589949 NOC3LQ8WTT2 800 aaKnown RBP19.39■□□□□ 0.69
H3F3B-209ENST00000589949 E2F7Q96AV8 911 aa19.39■□□□□ 0.69
H3F3B-209ENST00000589949 ZNF560Q96MR9 790 aa19.39■□□□□ 0.69
H3F3B-209ENST00000589949 PI4K2AQ9BTU6 479 aa19.39■□□□□ 0.69
H3F3B-209ENST00000589949 TRIM9Q9C026 710 aa19.39■□□□□ 0.69
H3F3B-209ENST00000589949 TASP1Q9H6P5 420 aa19.39■□□□□ 0.69
H3F3B-209ENST00000589949 GTSE1Q9NYZ3 720 aa19.39■□□□□ 0.69
H3F3B-209ENST00000589949 KINO60870 393 aaKnown RBP19.38■□□□□ 0.69
H3F3B-209ENST00000589949 PPP6R2O75170 966 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 LDHAP00338 332 aaKnown RBP19.38■□□□□ 0.69
H3F3B-209ENST00000589949 F11P03951 625 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 CASP1P29466 404 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 HOXC13P31276 330 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 PNPLA4P41247 253 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 BFSP1Q12934 665 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 VEPH1Q14D04 833 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 EPM2AIP1Q7L775 607 aaPredicted RBP19.38■□□□□ 0.69
H3F3B-209ENST00000589949 CCDC65Q8IXS2 484 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 YAF2Q8IY57 180 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 NUP210Q8TEM1 1887 aaPredicted RBP19.38■□□□□ 0.69
H3F3B-209ENST00000589949 C2orf15Q8WU43 125 aaKnown RBP19.38■□□□□ 0.69
H3F3B-209ENST00000589949 DHX58Q96C10 678 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 C2orf42Q9NWW7 574 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 ZSCAN32Q9NX65 697 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 GDAP2Q9NXN4 497 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 CCL26Q9Y258 94 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 PCDHB5Q9Y5E4 795 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 PCDHGA2Q9Y5H1 932 aa19.38■□□□□ 0.69
H3F3B-209ENST00000589949 FGF19O95750 216 aa19.37■□□□□ 0.69
H3F3B-209ENST00000589949 CYP2F1P24903 491 aa19.37■□□□□ 0.69
H3F3B-209ENST00000589949 MLLT6P55198 1093 aaPredicted RBP19.37■□□□□ 0.69
H3F3B-209ENST00000589949 NLRP12P59046 1061 aa19.37■□□□□ 0.69
H3F3B-209ENST00000589949 SOWAHAQ2M3V2 549 aa19.37■□□□□ 0.69
H3F3B-209ENST00000589949 FOXD4L6Q3SYB3 417 aaPredicted RBP19.37■□□□□ 0.69
H3F3B-209ENST00000589949 FOXD4L3Q6VB84 417 aaPredicted RBP19.37■□□□□ 0.69
H3F3B-209ENST00000589949 MAMSTRQ6ZN01 415 aa19.37■□□□□ 0.69
H3F3B-209ENST00000589949 DCP1BQ8IZD4 617 aaKnown RBP19.37■□□□□ 0.69
H3F3B-209ENST00000589949 GPD1LQ8N335 351 aa19.37■□□□□ 0.69
H3F3B-209ENST00000589949 LRRC52Q8N7C0 313 aa19.37■□□□□ 0.69
H3F3B-209ENST00000589949 CSGALNACT1Q8TDX6 532 aa19.37■□□□□ 0.69
H3F3B-209ENST00000589949 CACTINQ8WUQ7 758 aaKnown RBP19.37■□□□□ 0.69
H3F3B-209ENST00000589949 RUBCNQ92622 972 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms