RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 CEP76Q8TAP6 659 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 USP13Q92995 863 aaPredicted RBP6.68□□□□□ -1.34
VPS25-204ENST00000589577 CD101Q93033 1021 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 PSMG2Q969U7 264 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 UROC1Q96N76 676 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 TBC1D32Q96NH3 1257 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 PGLYRP2Q96PD5 576 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 TASP1Q9H6P5 420 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 THG1LQ9NWX6 298 aaKnown RBP6.68□□□□□ -1.34
VPS25-204ENST00000589577 BRPF3Q9ULD4 1205 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 MAFFQ9ULX9 164 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 GDAQ9Y2T3 454 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 CYP46A1Q9Y6A2 500 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 MYOFQ9NZM1 2061 aa6.68□□□□□ -1.34
VPS25-204ENST00000589577 KNL1Q8NG31 2342 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 ITPR2Q14571 2701 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 CYP3A7-CYP3A51PA0A087WV96 503 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 SMIM28A0A1B0GU29 152 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 H7C4K7 107 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 SGK1O00141 431 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 PLK4O00444 970 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 PODXLO00592 558 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 KRT10P13645 584 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 CYP3A7P24462 503 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 MCM5P33992 734 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 CSRP3P50461 194 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 USP11P51784 963 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 EPHB3P54753 998 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 MESP2Q0VG99 397 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 DUSP4Q13115 394 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 PPP2R5CQ13362 524 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 TFDP1Q14186 410 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 LY6DQ14210 128 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 RABEP1Q15276 862 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 ANKRD1Q15327 319 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 GAB4Q2WGN9 574 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 XKR9Q5GH70 373 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 ZNF280DQ6N043 979 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 SYNE3Q6ZMZ3 975 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 DNAJB7Q7Z6W7 309 aaPredicted RBP6.67□□□□□ -1.34
VPS25-204ENST00000589577 TTC30AQ86WT1 665 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 C4orf19Q8IY42 314 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 CMTM8Q8IZV2 173 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 TMEM130Q8N3G9 435 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 WHAMMQ8TF30 809 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 SPACA7Q96KW9 195 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 SUSD3Q96L08 255 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 JAKMIP1Q96N16 626 aaKnown RBP6.67□□□□□ -1.34
VPS25-204ENST00000589577 ZMAT2Q96NC0 199 aaKnown RBP6.67□□□□□ -1.34
VPS25-204ENST00000589577 LPIN3Q9BQK8 851 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 LXNQ9BS40 222 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 ECT2Q9H8V3 914 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 IL21RQ9HBE5 538 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 RBM28Q9NW13 759 aaKnown RBP6.67□□□□□ -1.34
VPS25-204ENST00000589577 RGL1Q9NZL6 768 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 CIZ1Q9ULV3 898 aaPredicted RBP6.67□□□□□ -1.34
VPS25-204ENST00000589577 SLC27A5Q9Y2P5 690 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 LRBAP50851 2863 aa6.67□□□□□ -1.34
VPS25-204ENST00000589577 AHCTF1Q8WYP5 2266 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 MTMR11A4FU01 709 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 N4BP3O15049 544 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 SLC37A4O43826 429 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 SLC28A2O43868 658 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 ADAM23O75077 832 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 P4HBP07237 508 aaKnown RBP6.66□□□□□ -1.34
VPS25-204ENST00000589577 SYPP08247 313 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 C6P13671 934 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 HLA-EP13747 358 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 ATF6P18850 670 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 NMT1P30419 496 aaKnown RBP6.66□□□□□ -1.34
VPS25-204ENST00000589577 OPRD1P41143 372 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 RPL6Q02878 288 aaKnown RBP6.66□□□□□ -1.34
VPS25-204ENST00000589577 TLE3Q04726 772 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 ZNF33AQ06730 810 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 MYO1EQ12965 1108 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 GRIK2Q13002 908 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 PLD1Q13393 1074 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 BECN1Q14457 450 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 NECTIN1Q15223 517 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 RTN1Q16799 776 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 PTPRNQ16849 979 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 FAM187BQ17R55 369 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 TSGA10IPQ3SY00 556 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 ARHGAP15Q53QZ3 475 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 XKR4Q5GH76 650 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 CDCA2Q69YH5 1023 aaPredicted RBP6.66□□□□□ -1.34
VPS25-204ENST00000589577 CENPPQ6IPU0 288 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 ALKAL1Q6UXT8 129 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 GALNT15Q8N3T1 639 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 ALLCQ8N6M5 410 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 CEP120Q8N960 986 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 IL17RCQ8NAC3 791 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 TBCKQ8TEA7 893 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 HMGB4Q8WW32 186 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 DDX12PQ92771 950 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 PRIMPOLQ96LW4 560 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 TM6SF1Q9BZW5 370 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 CCDC113Q9H0I3 377 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 C6orf50Q9HD87 102 aa6.66□□□□□ -1.34
VPS25-204ENST00000589577 ZDHHC4Q9NPG8 344 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms