RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 TBX3O15119 743 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 DARSP14868 501 aaKnown RBP9.14□□□□□ -0.95
DNMT1-219ENST00000589349 POU3F3P20264 500 aaPredicted RBP9.14□□□□□ -0.95
DNMT1-219ENST00000589349 IRAK1P51617 712 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 HMGN5P82970 282 aaKnown RBP9.14□□□□□ -0.95
DNMT1-219ENST00000589349 RNASELQ05823 741 aaKnown RBP9.14□□□□□ -0.95
DNMT1-219ENST00000589349 NCBP1Q09161 790 aaKnown RBP9.14□□□□□ -0.95
DNMT1-219ENST00000589349 EPHA7Q15375 998 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 NLRC3Q7RTR2 1065 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 WFDC3Q8IUB2 231 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 EXOC8Q8IYI6 725 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 PSPC1Q8WXF1 523 aaKnown RBP9.14□□□□□ -0.95
DNMT1-219ENST00000589349 KREMEN1Q96MU8 473 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 MBOAT7Q96N66 472 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 EIF2AK1Q9BQI3 630 aaKnown RBP9.14□□□□□ -0.95
DNMT1-219ENST00000589349 GBP3Q9H0R5 595 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 ADAMTS10Q9H324 1103 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 CCSER2Q9H7U1 834 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 UBE2ZQ9H832 354 aaPredicted RBP9.14□□□□□ -0.95
DNMT1-219ENST00000589349 TYW1Q9NV66 732 aaKnown RBP9.14□□□□□ -0.95
DNMT1-219ENST00000589349 DACT1Q9NYF0 836 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 PUF60Q9UHX1 559 aaKnown RBP9.14□□□□□ -0.95
DNMT1-219ENST00000589349 INPP5FQ9Y2H2 1132 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 ST14Q9Y5Y6 855 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 PRRC2BQ5JSZ5 2229 aaKnown RBP9.14□□□□□ -0.95
DNMT1-219ENST00000589349 MICAL3Q7RTP6 2002 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 MYH9P35579 1960 aaKnown RBP9.13□□□□□ -0.95
DNMT1-219ENST00000589349 H3BQV1 296 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 ERLIN2O94905 339 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 TCF3P15923 654 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 FUT4P22083 530 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 CCNFP41002 786 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 TECP42680 631 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 NDUFV1P49821 464 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 RNF4P78317 190 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 KRT17Q04695 432 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 TNK2Q07912 1038 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 RAD51AP2Q09MP3 1159 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 IKZF1Q13422 519 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 ZRSR1Q15695 479 aaKnown RBP9.13□□□□□ -0.95
DNMT1-219ENST00000589349 ANO5Q75V66 913 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 ERMNQ8TAM6 284 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 POF1BQ8WVV4 589 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 TCP11Q8WWU5 503 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 HAS1Q92839 578 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 LLPHQ9BRT6 129 aaKnown RBP9.13□□□□□ -0.95
DNMT1-219ENST00000589349 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.13□□□□□ -0.95
DNMT1-219ENST00000589349 KCNMB3Q9NPA1 279 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 ENTPD7Q9NQZ7 604 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 TMEM161AQ9NX61 479 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 KIF3AQ9Y496 699 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 COL4A3BPQ9Y5P4 624 aa9.13□□□□□ -0.95
DNMT1-219ENST00000589349 EVPLQ92817 2033 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 PTPRSQ13332 1948 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 C9IYK1 514 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 H3BS24 57 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 INO80B-WBP1J3KQ70 363 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 USO1O60763 962 aaKnown RBP9.12□□□□□ -0.95
DNMT1-219ENST00000589349 MAFO75444 373 aaPredicted RBP9.12□□□□□ -0.95
DNMT1-219ENST00000589349 LAMTOR4Q0VGL1 99 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 TFDP1Q14186 410 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 BMS1Q14692 1282 aaKnown RBP9.12□□□□□ -0.95
DNMT1-219ENST00000589349 EMC2Q15006 297 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 RABEP1Q15276 862 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 TARBP2Q15633 366 aaKnown RBP9.12□□□□□ -0.95
DNMT1-219ENST00000589349 TTC38Q5R3I4 469 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 ECHDC2Q86YB7 292 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 RNF149Q8NC42 400 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 PIGOQ8TEQ8 1089 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 PRPF31Q8WWY3 499 aaKnown RBP9.12□□□□□ -0.95
DNMT1-219ENST00000589349 ZNF689Q96CS4 500 aaPredicted RBP9.12□□□□□ -0.95
DNMT1-219ENST00000589349 ZNF558Q96NG5 402 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 FAM193BQ96PV7 902 aaPredicted RBP9.12□□□□□ -0.95
DNMT1-219ENST00000589349 APOL6Q9BWW8 343 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 TMEM117Q9H0C3 514 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 LMAN2LQ9H0V9 348 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 TRIT1Q9H3H1 467 aaKnown RBP9.12□□□□□ -0.95
DNMT1-219ENST00000589349 TLE6Q9H808 572 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 SEMA3GQ9NS98 782 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 FAM50BQ9Y247 325 aa9.12□□□□□ -0.95
DNMT1-219ENST00000589349 PER2O15055 1255 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 NCK2O43639 380 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 FGF18O76093 207 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 SLITRK3O94933 977 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 ITGB1P05556 798 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 OR52Z1P0C646 297 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 NME1P15531 152 aaKnown RBP9.11□□□□□ -0.95
DNMT1-219ENST00000589349 LAG3P18627 525 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 CD96P40200 585 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 PBX3P40426 434 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 NRIP1P48552 1158 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 ALDH7A1P49419 539 aaKnown RBP9.11□□□□□ -0.95
DNMT1-219ENST00000589349 NAALADL2Q58DX5 795 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 PLPP4Q5VZY2 271 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 GLB1LQ6UWU2 654 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 ZNF410Q86VK4 478 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 C4orf19Q8IY42 314 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 LRRC43Q8N309 656 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 DTWD2Q8NBA8 298 aa9.11□□□□□ -0.95
DNMT1-219ENST00000589349 COLGALT1Q8NBJ5 622 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms