RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 KATNAL2Q8IYT4 538 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 TMEM35BQ8NCS4 154 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 CPA5Q8WXQ8 436 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 PIK3R5Q8WYR1 880 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 BTBD6Q96KE9 485 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 NEUROG2Q9H2A3 272 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 DPH5Q9H2P9 285 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 PLEKHA4Q9H4M7 779 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 LRRC19Q9H756 370 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 PDGFCQ9NRA1 345 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 HOMER3Q9NSC5 361 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 MTMR10Q9NXD2 777 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 IP6K2Q9UHH9 426 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 ZHX1Q9UKY1 873 aaPredicted RBP10.56□□□□□ -0.72
VPS25-202ENST00000589219 STRIP2Q9ULQ0 834 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 PLAAQ9Y263 795 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 ERICH4A6NGS2 130 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 DCDC2CA8MYV0 355 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 ADAMTS4O75173 837 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 SNAI1O95863 264 aaPredicted RBP10.55□□□□□ -0.72
VPS25-202ENST00000589219 PAEPP09466 180 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 CLTBP09497 229 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 MYZAPP0CAP1 466 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 P4HA1P13674 534 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 INSRRP14616 1297 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 MMP8P22894 467 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 EIF4BP23588 611 aaKnown RBP10.55□□□□□ -0.72
VPS25-202ENST00000589219 ATICP31939 592 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 CETN2P41208 172 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 ASPAP45381 313 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 ACLYP53396 1101 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 GSCP56915 257 aaPredicted RBP10.55□□□□□ -0.72
VPS25-202ENST00000589219 TFAMQ00059 246 aaKnown RBP10.55□□□□□ -0.72
VPS25-202ENST00000589219 ACVR2BQ13705 512 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 UAP1Q16222 522 aaPredicted RBP10.55□□□□□ -0.72
VPS25-202ENST00000589219 SEZ6Q53EL9 994 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 SGO2Q562F6 1265 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 AGBL2Q5U5Z8 902 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 EEF1DP3Q658K8 133 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 DNAJC24Q6P3W2 148 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 KDM7AQ6ZMT4 941 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 MMS22LQ6ZRQ5 1243 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 Q7L0L9 218 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 ZNF410Q86VK4 478 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 HOOK3Q86VS8 718 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 DDX42Q86XP3 938 aaKnown RBP eCLIP10.55□□□□□ -0.72
VPS25-202ENST00000589219 NT5DC4Q86YG4 428 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 PASD1Q8IV76 773 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 THNSL1Q8IYQ7 743 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 TTC39CQ8N584 583 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 ARFGAP2Q8N6H7 521 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 PCSK9Q8NBP7 692 aaKnown RBP10.55□□□□□ -0.72
VPS25-202ENST00000589219 FEZF2Q8TBJ5 459 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 TRAPPC12Q8WVT3 735 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 ZNF606Q8WXB4 792 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 BADQ92934 168 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 ELMO3Q96BJ8 720 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 C18orf8Q96DM3 657 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 FAM212AQ96EL1 285 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 DDX27Q96GQ7 796 aaKnown RBP10.55□□□□□ -0.72
VPS25-202ENST00000589219 ATP6V1G3Q96LB4 118 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 BCO2Q9BYV7 579 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 TXLNGYQ9BZA5 131 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 KATNBL1Q9H079 304 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 ZMYND15Q9H091 742 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 XYLT2Q9H1B5 865 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 ASB7Q9H672 318 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 VRTNQ9H8Y1 702 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 CYP3A43Q9HB55 503 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 CISHQ9NSE2 258 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 ZDHHC18Q9NUE0 388 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 CHORDC1Q9UHD1 332 aaPredicted RBP10.55□□□□□ -0.72
VPS25-202ENST00000589219 PRDM4Q9UKN5 801 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 NR2E1Q9Y466 385 aa10.55□□□□□ -0.72
VPS25-202ENST00000589219 FAM170AA1A519 330 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 B4GALT5O43286 388 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 PQBP1O60828 265 aaKnown RBP10.54□□□□□ -0.72
VPS25-202ENST00000589219 PPFIA4O75335 1185 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 STAU1O95793 577 aaKnown RBP10.54□□□□□ -0.72
VPS25-202ENST00000589219 GAS8O95995 478 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 NUDT17P0C025 328 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 C6orf222P0C671 652 aaPredicted RBP10.54□□□□□ -0.72
VPS25-202ENST00000589219 CXCL8P10145 99 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 RARAP10276 462 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 RAG1P15918 1043 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 POLR2BP30876 1174 aaKnown RBP10.54□□□□□ -0.72
VPS25-202ENST00000589219 MAMLD1Q13495 774 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 SLMAPQ14BN4 828 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 TRADDQ15628 312 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 KCNA10Q16322 511 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 ZSCAN26Q16670 478 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 AMHR2Q16671 573 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 DCAF4L1Q3SXM0 396 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 ZNF667Q5HYK9 610 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 CEP85LQ5SZL2 805 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 EMC10Q5UCC4 262 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 LRRC38Q5VT99 294 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 AADACL2Q6P093 401 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 TTC27Q6P3X3 843 aa10.54□□□□□ -0.72
VPS25-202ENST00000589219 ZDHHC24Q6UX98 284 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms