RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 DNAJC25Q9H1X3 360 aa20.64■□□□□ 0.89
CIRBP-221ENST00000589161 PCDHB5Q9Y5E4 795 aa20.64■□□□□ 0.89
CIRBP-221ENST00000589161 NOTCH4Q99466 2003 aa20.63■□□□□ 0.89
CIRBP-221ENST00000589161 GABRDO14764 452 aa20.63■□□□□ 0.89
CIRBP-221ENST00000589161 PCSK1P29120 753 aa20.63■□□□□ 0.89
CIRBP-221ENST00000589161 PLA2G5P39877 138 aa20.63■□□□□ 0.89
CIRBP-221ENST00000589161 CLCN5P51795 746 aa20.63■□□□□ 0.89
CIRBP-221ENST00000589161 AP3M2P53677 418 aa20.63■□□□□ 0.89
CIRBP-221ENST00000589161 VCPP55072 806 aaKnown RBP20.63■□□□□ 0.89
CIRBP-221ENST00000589161 VEPH1Q14D04 833 aa20.63■□□□□ 0.89
CIRBP-221ENST00000589161 LIMS2Q7Z4I7 341 aa20.63■□□□□ 0.89
CIRBP-221ENST00000589161 FMR1NBQ8N0W7 255 aaPredicted RBP20.63■□□□□ 0.89
CIRBP-221ENST00000589161 FAM200AQ8TCP9 573 aa20.63■□□□□ 0.89
CIRBP-221ENST00000589161 GPR152Q8TDT2 470 aa20.63■□□□□ 0.89
CIRBP-221ENST00000589161 KXD1Q9BQD3 176 aa20.63■□□□□ 0.89
CIRBP-221ENST00000589161 LRRC3Q9BY71 257 aa20.63■□□□□ 0.89
CIRBP-221ENST00000589161 ABI2Q9NYB9 513 aaPredicted RBP20.63■□□□□ 0.89
CIRBP-221ENST00000589161 TCHHQ07283 1943 aa20.63■□□□□ 0.89
CIRBP-221ENST00000589161 MOSPD3O75425 235 aa20.62■□□□□ 0.89
CIRBP-221ENST00000589161 SOAT2O75908 522 aa20.62■□□□□ 0.89
CIRBP-221ENST00000589161 CST3P01034 146 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-221ENST00000589161 NR3C1P04150 777 aa20.62■□□□□ 0.89
CIRBP-221ENST00000589161 HAPLN1P10915 354 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-221ENST00000589161 GPC5P78333 572 aa20.62■□□□□ 0.89
CIRBP-221ENST00000589161 TRPC3Q13507 836 aa20.62■□□□□ 0.89
CIRBP-221ENST00000589161 INTS6LQ5JSJ4 861 aaKnown RBP20.62■□□□□ 0.89
CIRBP-221ENST00000589161 IER5LQ5T953 404 aa20.62■□□□□ 0.89
CIRBP-221ENST00000589161 TMC8Q8IU68 726 aa20.62■□□□□ 0.89
CIRBP-221ENST00000589161 FLCNQ8NFG4 579 aa20.62■□□□□ 0.89
CIRBP-221ENST00000589161 PARD3BQ8TEW8 1205 aa20.62■□□□□ 0.89
CIRBP-221ENST00000589161 ZNF516Q92618 1163 aa20.62■□□□□ 0.89
CIRBP-221ENST00000589161 ELSPBP1Q96BH3 223 aa20.62■□□□□ 0.89
CIRBP-221ENST00000589161 MMS19Q96T76 1030 aa20.62■□□□□ 0.89
CIRBP-221ENST00000589161 ZFP14Q9HCL3 533 aa20.62■□□□□ 0.89
CIRBP-221ENST00000589161 TRAF3IP3Q9Y228 551 aa20.62■□□□□ 0.89
CIRBP-221ENST00000589161 FRMD4BQ9Y2L6 1034 aa20.62■□□□□ 0.89
CIRBP-221ENST00000589161 PHACTR2O75167 634 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 FAM163BP0C2L3 166 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 NPR3P17342 541 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 ACAT1P24752 427 aaKnown RBP20.61■□□□□ 0.89
CIRBP-221ENST00000589161 ATICP31939 592 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 CLDN10P78369 228 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 PFKPQ01813 784 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 TAF12Q16514 161 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 FAM78AQ5JUQ0 283 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 POTEHQ6S545 545 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 OSTM1Q86WC4 334 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 GUF1Q8N442 669 aaKnown RBP20.61■□□□□ 0.89
CIRBP-221ENST00000589161 SHKBP1Q8TBC3 707 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 SMARCD2Q92925 531 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 ASB16Q96NS5 453 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 GZF1Q9H116 711 aaPredicted RBP20.61■□□□□ 0.89
CIRBP-221ENST00000589161 ABCB6Q9NP58 842 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 TMLHEQ9NVH6 421 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 CA14Q9ULX7 337 aa20.61■□□□□ 0.89
CIRBP-221ENST00000589161 TSC2P49815 1807 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 KRBA1A5PL33 1030 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 STK25O00506 426 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 STAU1O95793 577 aaKnown RBP20.6■□□□□ 0.89
CIRBP-221ENST00000589161 GJA1P17302 382 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 RFX1P22670 979 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 CDR1P51861 262 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 FAM160A1Q05DH4 1040 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 SNW1Q13573 536 aaKnown RBP20.6■□□□□ 0.89
CIRBP-221ENST00000589161 TEAD2Q15562 447 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 NFIL3Q16649 462 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 TANGO2Q6ICL3 276 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 ENGASEQ8NFI3 743 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 SYAP1Q96A49 352 aaPredicted RBP20.6■□□□□ 0.89
CIRBP-221ENST00000589161 ZSWIM3Q96MP5 696 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 LPIN3Q9BQK8 851 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 SLITRK6Q9H5Y7 841 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 ARHGEF3Q9NR81 526 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 RMND1Q9NWS8 449 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 GTF3C4Q9UKN8 822 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 CDH9Q9ULB4 789 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 ZDBF2Q9HCK1 2354 aa20.6■□□□□ 0.89
CIRBP-221ENST00000589161 ZNF318Q5VUA4 2279 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 A0A1W2PRU2 124 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 LRRIQ3A6PVS8 624 aaPredicted RBP20.59■□□□□ 0.89
CIRBP-221ENST00000589161 ATF6P18850 670 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 AOC1P19801 751 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 WARSP23381 471 aaKnown RBP20.59■□□□□ 0.89
CIRBP-221ENST00000589161 RPL13P26373 211 aaKnown RBP20.59■□□□□ 0.89
CIRBP-221ENST00000589161 CASP4P49662 377 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 TNNC1P63316 161 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 BIRC3Q13489 604 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 WDR72Q3MJ13 1102 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 ARHGAP15Q53QZ3 475 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 CEP135Q66GS9 1140 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 TMEM105Q8N8V8 129 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 ZSCAN18Q8TBC5 510 aaPredicted RBP20.59■□□□□ 0.89
CIRBP-221ENST00000589161 PLEKHO2Q8TD55 490 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 TMC2Q8TDI7 906 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 KBTBD7Q8WVZ9 684 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 E2F7Q96AV8 911 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 SHDQ96IW2 340 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 PKMYT1Q99640 499 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 PI4K2AQ9BTU6 479 aa20.59■□□□□ 0.89
CIRBP-221ENST00000589161 ATXN3LQ9H3M9 355 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms