RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 KRT17Q04695 432 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 CCNG2Q16589 344 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 ZFYVE27Q5T4F4 411 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 IER5Q5VY09 327 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 TDRD10Q5VZ19 366 aaKnown RBP7.85□□□□□ -1.15
ZNF540-206ENST00000589117 CCDC25Q86WR0 208 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 PHF13Q86YI8 300 aaPredicted RBP7.85□□□□□ -1.15
ZNF540-206ENST00000589117 ZBTB8OSQ8IWT0 167 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 EXD1Q8NHP7 514 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 SEPT1Q8WYJ6 367 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 CYFIP2Q96F07 1278 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 CHMP6Q96FZ7 201 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 RBM41Q96IZ5 413 aaKnown RBP7.85□□□□□ -1.15
ZNF540-206ENST00000589117 CCDC114Q96M63 670 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 SERPINB12Q96P63 405 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 MRPL4Q9BYD3 311 aaKnown RBP7.85□□□□□ -1.15
ZNF540-206ENST00000589117 ZNF518BQ9C0D4 1074 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 NSRP1Q9H0G5 558 aaKnown RBP7.85□□□□□ -1.15
ZNF540-206ENST00000589117 C2orf40Q9H1Z8 148 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 SEMA4AQ9H3S1 761 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 INTS9Q9NV88 658 aaKnown RBP7.85□□□□□ -1.15
ZNF540-206ENST00000589117 ANAPC5Q9UJX4 755 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 TOM1L1O75674 476 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 TJP3O95049 919 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 S1PR4O95977 384 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 CLTAP09496 248 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 KCNJ1P48048 391 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 NOP14P78316 857 aaKnown RBP7.84□□□□□ -1.15
ZNF540-206ENST00000589117 TRPC3Q13507 836 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 DUOXA2Q1HG44 320 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 SGSM1Q2NKQ1 1148 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 SH3PXD2AQ5TCZ1 1133 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 MFSD5Q6N075 450 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 MON1BQ7L1V2 547 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 GSTA5Q7RTV2 222 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 TAX1BP1Q86VP1 789 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 WDR49Q8IV35 697 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 KATNAL2Q8IYT4 538 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 RCOR2Q8IZ40 523 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 RBBP8NLQ8NC74 664 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-206ENST00000589117 C1orf54Q8WWF1 131 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 RAPGEF5Q92565 580 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 TARS2Q9BW92 718 aaKnown RBP7.84□□□□□ -1.15
ZNF540-206ENST00000589117 MTFR1LQ9H019 292 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 ACTR5Q9H9F9 607 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-206ENST00000589117 CYLDQ9NQC7 956 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 CNTN6Q9UQ52 1028 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 CSADQ9Y600 493 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 IGKV6D-21A0A0A0MT36 114 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 TLR3O15455 904 aaKnown RBP7.84□□□□□ -1.15
ZNF540-206ENST00000589117 MYCP01106 439 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-206ENST00000589117 TMOD1P28289 359 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 POLR2BP30876 1174 aaKnown RBP7.84□□□□□ -1.15
ZNF540-206ENST00000589117 MMP13P45452 471 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 LIG3P49916 1009 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 ALDH5A1P51649 535 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-206ENST00000589117 IFT88Q13099 833 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 MAMLD1Q13495 774 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 SNX1Q13596 522 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 PTK6Q13882 451 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 PLCB4Q15147 1175 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 SIX1Q15475 284 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-206ENST00000589117 MAPK6Q16659 721 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 ERMARDQ5T6L9 678 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 PLEKHA7Q6IQ23 1121 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 LBX2Q6XYB7 198 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 RIOX2Q8IUF8 465 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 TMEM35BQ8NCS4 154 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 FEZF2Q8TBJ5 459 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 XPO6Q96QU8 1125 aaKnown RBP7.84□□□□□ -1.15
ZNF540-206ENST00000589117 FAM129BQ96TA1 746 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 SELENOSQ9BQE4 189 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 SLC6A16Q9GZN6 736 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 SAMD15Q9P1V8 674 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 VTI1BQ9UEU0 232 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 CD2APQ9Y5K6 639 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 MROH7Q68CQ1 1323 aa7.84□□□□□ -1.15
ZNF540-206ENST00000589117 DOCK1Q14185 1865 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 TCRBV7S2A1N4TA0A589 114 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 ANKRD65E5RJM6 399 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 NOP56O00567 594 aaKnown RBP7.83□□□□□ -1.16
ZNF540-206ENST00000589117 MAFO75444 373 aaPredicted RBP7.83□□□□□ -1.16
ZNF540-206ENST00000589117 ZBTB7AO95365 584 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 SHBGP04278 402 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 ACO1P21399 889 aaKnown RBP7.83□□□□□ -1.16
ZNF540-206ENST00000589117 NOMO3P69849 1222 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 DAB2P98082 770 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 SP2Q02086 613 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 TFDP1Q14186 410 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 LRRC38Q5VT99 294 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 LMBRD2Q68DH5 695 aaPredicted RBP7.83□□□□□ -1.16
ZNF540-206ENST00000589117 DCUN1D2Q6PH85 259 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 METTL7BQ6UX53 244 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 CRELD2Q6UXH1 353 aaPredicted RBP7.83□□□□□ -1.16
ZNF540-206ENST00000589117 ASAP3Q8TDY4 903 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 IPO4Q8TEX9 1081 aaKnown RBP7.83□□□□□ -1.16
ZNF540-206ENST00000589117 DYDC1Q8WWB3 177 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 ZNF606Q8WXB4 792 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 C11orf70Q9BRQ4 267 aa7.83□□□□□ -1.16
ZNF540-206ENST00000589117 OSBPL8Q9BZF1 889 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms