RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 EPHB3P54753 998 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 RBP5P82980 135 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 TCF15Q12870 199 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 STK4Q13043 487 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 MGAT5BQ3V5L5 792 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 TANGO2Q6ICL3 276 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 MTSS1LQ765P7 747 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 NT5DC4Q86YG4 428 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 PDCL2Q8N4E4 241 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 FAM200AQ8TCP9 573 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 ERCC4Q92889 916 aaPredicted RBP12.43□□□□□ -0.42
RFX1-204ENST00000588885 ZNF560Q96MR9 790 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 LPIN3Q9BQK8 851 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 ZCWPW1Q9H0M4 648 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 ASAH2Q9NR71 780 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 INTS13Q9NVM9 706 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 GDE1Q9NZC3 331 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 WNT16Q9UBV4 365 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 L1RE1Q9UN81 338 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 R3HCC1Q9Y3T6 440 aaKnown RBP12.43□□□□□ -0.42
RFX1-204ENST00000588885 SNX9Q9Y5X1 595 aa12.43□□□□□ -0.42
RFX1-204ENST00000588885 KIAA0391O15091 583 aaKnown RBP12.42□□□□□ -0.42
RFX1-204ENST00000588885 HCRTO43612 131 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 KLRC4O43908 158 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 GFRA3O60609 400 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 HUS1O60921 280 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 MOSPD3O75425 235 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 TNNC2P02585 160 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 PNPLA4P41247 253 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 VIPR2P41587 438 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 CLCN5P51795 746 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 NUBP1P53384 320 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 EHHADHQ08426 723 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 PNOCQ13519 176 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 GRM2Q14416 872 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 TEAD2Q15562 447 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 SNRNP35Q16560 246 aaKnown RBP12.42□□□□□ -0.42
RFX1-204ENST00000588885 DUOXA2Q1HG44 320 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 KMT5BQ4FZB7 885 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 FAM78AQ5JUQ0 283 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 CWF19L1Q69YN2 538 aaKnown RBP12.42□□□□□ -0.42
RFX1-204ENST00000588885 RBM43Q6ZSC3 357 aaKnown RBP12.42□□□□□ -0.42
RFX1-204ENST00000588885 HS2ST1Q7LGA3 356 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 DNAJB7Q7Z6W7 309 aaPredicted RBP12.42□□□□□ -0.42
RFX1-204ENST00000588885 CXorf38Q8TB03 319 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 GIPC2Q8TF65 315 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 ANKRD36BP1Q96IX9 119 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 DNAJC25Q9H1X3 360 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 SLITRK6Q9H5Y7 841 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 TBC1D17Q9HA65 648 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 ZNF334Q9HCZ1 680 aaPredicted RBP12.42□□□□□ -0.42
RFX1-204ENST00000588885 AVENQ9NQS1 362 aaPredicted RBP12.42□□□□□ -0.42
RFX1-204ENST00000588885 EXOC1Q9NV70 894 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 TMLHEQ9NVH6 421 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 ABI2Q9NYB9 513 aaPredicted RBP12.42□□□□□ -0.42
RFX1-204ENST00000588885 USP25Q9UHP3 1055 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 ITGA11Q9UKX5 1188 aa12.42□□□□□ -0.42
RFX1-204ENST00000588885 CACNA1HO95180 2353 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 A0A1W2PRU2 124 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 TNNI1P19237 187 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 GPR15P49685 360 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 TSPY1Q01534 308 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 CYP24A1Q07973 514 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 PLD1Q13393 1074 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 TAF12Q16514 161 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 CCDC142Q17RM4 750 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 KNOP1Q1ED39 458 aaKnown RBP12.41□□□□□ -0.42
RFX1-204ENST00000588885 OSTM1Q86WC4 334 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 DCP1BQ8IZD4 617 aaKnown RBP12.41□□□□□ -0.42
RFX1-204ENST00000588885 XXYLT1Q8NBI6 393 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 SHKBP1Q8TBC3 707 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 HPDLQ96IR7 371 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 FNBP1Q96RU3 617 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 PI4K2AQ9BTU6 479 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 KIAA1586Q9HCI6 787 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 ARHGEF3Q9NR81 526 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 SLC2A4RGQ9NR83 387 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 DDX43Q9NXZ2 648 aaKnown RBP12.41□□□□□ -0.42
RFX1-204ENST00000588885 VPS13AQ96RL7 3174 aa12.41□□□□□ -0.42
RFX1-204ENST00000588885 WDR87Q6ZQQ6 2873 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 ZFHX2Q9C0A1 2572 aaPredicted RBP12.4□□□□□ -0.42
RFX1-204ENST00000588885 EXOC3O60645 756 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 ECI2O75521 394 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 DCNP07585 359 aaKnown RBP12.4□□□□□ -0.42
RFX1-204ENST00000588885 AOC1P19801 751 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 CD72P21854 359 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 TUFMP49411 452 aaKnown RBP12.4□□□□□ -0.42
RFX1-204ENST00000588885 CASP4P49662 377 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 MYO1EQ12965 1108 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 SURF1Q15526 300 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 SLC44A4Q53GD3 710 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 STXBP5Q5T5C0 1151 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 SDHAF4Q5VUM1 108 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 TRAPPC11Q7Z392 1133 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 LRRC52Q8N7C0 313 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 KIAA0895Q8NCT3 520 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 STKLD1Q8NE28 680 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 ZSCAN18Q8TBC5 510 aaPredicted RBP12.4□□□□□ -0.42
RFX1-204ENST00000588885 SMARCD2Q92925 531 aa12.4□□□□□ -0.42
RFX1-204ENST00000588885 MMS19Q96T76 1030 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms