RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 GALCP54803 685 aa23.68■■□□□ 1.38
ATG4D-209ENST00000588857 TFAP2BQ92481 460 aa23.68■■□□□ 1.38
ATG4D-209ENST00000588857 DUSP10Q9Y6W6 482 aa23.68■■□□□ 1.38
ATG4D-209ENST00000588857 MACROD2A1Z1Q3 448 aa23.67■■□□□ 1.38
ATG4D-209ENST00000588857 TBKBP1A7MCY6 615 aa23.67■■□□□ 1.38
ATG4D-209ENST00000588857 WARSP23381 471 aaKnown RBP23.67■■□□□ 1.38
ATG4D-209ENST00000588857 OR1G1P47890 313 aa23.67■■□□□ 1.38
ATG4D-209ENST00000588857 AARSP49588 968 aaKnown RBP eCLIP23.67■■□□□ 1.38
ATG4D-209ENST00000588857 GATMP50440 423 aa23.67■■□□□ 1.38
ATG4D-209ENST00000588857 GNG11P61952 73 aa23.67■■□□□ 1.38
ATG4D-209ENST00000588857 PAN2Q504Q3 1202 aaKnown RBP23.67■■□□□ 1.38
ATG4D-209ENST00000588857 SGO2Q562F6 1265 aa23.67■■□□□ 1.38
ATG4D-209ENST00000588857 ACAD10Q6JQN1 1059 aa23.67■■□□□ 1.38
ATG4D-209ENST00000588857 DNAAF5Q86Y56 855 aa23.67■■□□□ 1.38
ATG4D-209ENST00000588857 PASD1Q8IV76 773 aa23.67■■□□□ 1.38
ATG4D-209ENST00000588857 TMEM86AQ8N2M4 240 aa23.67■■□□□ 1.38
ATG4D-209ENST00000588857 CTNNBL1Q8WYA6 563 aaPredicted RBP23.67■■□□□ 1.38
ATG4D-209ENST00000588857 CYFIP2Q96F07 1278 aa23.67■■□□□ 1.38
ATG4D-209ENST00000588857 IL23AQ9NPF7 189 aa23.67■■□□□ 1.38
ATG4D-209ENST00000588857 PCDHGC3Q9UN70 934 aa23.67■■□□□ 1.38
ATG4D-209ENST00000588857 CEP83Q9Y592 693 aa23.67■■□□□ 1.38
ATG4D-209ENST00000588857 MYH10P35580 1976 aa23.66■■□□□ 1.38
ATG4D-209ENST00000588857 ARHGEF37A1IGU5 675 aa23.66■■□□□ 1.38
ATG4D-209ENST00000588857 ANKRD62A6NC57 917 aa23.66■■□□□ 1.38
ATG4D-209ENST00000588857 CYP1A1P04798 512 aaPredicted RBP23.66■■□□□ 1.38
ATG4D-209ENST00000588857 ODC1P11926 461 aa23.66■■□□□ 1.38
ATG4D-209ENST00000588857 SSTR3P32745 418 aaPredicted RBP23.66■■□□□ 1.38
ATG4D-209ENST00000588857 NSFP46459 744 aaKnown RBP23.66■■□□□ 1.38
ATG4D-209ENST00000588857 ETF1P62495 437 aaKnown RBP23.66■■□□□ 1.38
ATG4D-209ENST00000588857 FPGSQ05932 587 aa23.66■■□□□ 1.38
ATG4D-209ENST00000588857 LRIT3Q3SXY7 679 aa23.66■■□□□ 1.38
ATG4D-209ENST00000588857 TIGD5Q53EQ6 642 aa23.66■■□□□ 1.38
ATG4D-209ENST00000588857 NAA35Q5VZE5 725 aa23.66■■□□□ 1.38
ATG4D-209ENST00000588857 WSCD1Q658N2 575 aa23.66■■□□□ 1.38
ATG4D-209ENST00000588857 PPP1R2P3Q6NXS1 205 aa23.66■■□□□ 1.38
ATG4D-209ENST00000588857 ACOT1Q86TX2 421 aa23.66■■□□□ 1.38
ATG4D-209ENST00000588857 SECISBP2LQ93073 1101 aaKnown RBP23.66■■□□□ 1.38
ATG4D-209ENST00000588857 ZSWIM1Q9BR11 485 aa23.66■■□□□ 1.38
ATG4D-209ENST00000588857 MYO1AQ9UBC5 1043 aa23.66■■□□□ 1.38
ATG4D-209ENST00000588857 STXBP5LQ9Y2K9 1186 aa23.66■■□□□ 1.38
ATG4D-209ENST00000588857 FAM170AA1A519 330 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 B4GALT3O60512 393 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 KIF4AO95239 1232 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 LSM8O95777 96 aaKnown RBP23.65■■□□□ 1.38
ATG4D-209ENST00000588857 CFHP08603 1231 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 PDGFRBP09619 1106 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 TMEM253P0C7T8 217 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 ACRP10323 421 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 UNGP13051 313 aaPredicted RBP23.65■■□□□ 1.38
ATG4D-209ENST00000588857 ABCB4P21439 1286 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 HASPINQ8TF76 798 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 IRX2Q9BZI1 471 aaPredicted RBP23.65■■□□□ 1.38
ATG4D-209ENST00000588857 DNAJB4Q9UDY4 337 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 PAXBP1Q9Y5B6 917 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 BTNL10A8MVZ5 291 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 BAIAP3O94812 1187 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 LHX1P48742 406 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 NAP1L1P55209 391 aaKnown RBP23.65■■□□□ 1.38
ATG4D-209ENST00000588857 PPIGQ13427 754 aaKnown RBP eCLIP23.65■■□□□ 1.382e-6■■□□□ 14.2
ATG4D-209ENST00000588857 ZNF569Q5MCW4 686 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 METTL23Q86XA0 190 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 LRRC43Q8N309 656 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 RNF10Q8N5U6 811 aaKnown RBP23.65■■□□□ 1.38
ATG4D-209ENST00000588857 TMEM35BQ8NCS4 154 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 CPA5Q8WXQ8 436 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 TNIP3Q96KP6 325 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 ZNF518BQ9C0D4 1074 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 NRDE2Q9H7Z3 1164 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 DSEQ9UL01 958 aa23.65■■□□□ 1.38
ATG4D-209ENST00000588857 TMEM189-UBE2V1I3L0A0 370 aa23.64■■□□□ 1.37
ATG4D-209ENST00000588857 BRCC3P46736 316 aa23.64■■□□□ 1.37
ATG4D-209ENST00000588857 EPHB4P54760 987 aa23.64■■□□□ 1.37
ATG4D-209ENST00000588857 NOMO3P69849 1222 aa23.64■■□□□ 1.37
ATG4D-209ENST00000588857 CENPCQ03188 943 aa23.64■■□□□ 1.37
ATG4D-209ENST00000588857 SHHQ15465 462 aa23.64■■□□□ 1.37
ATG4D-209ENST00000588857 STILQ15468 1287 aa23.64■■□□□ 1.37
ATG4D-209ENST00000588857 CNGA2Q16280 664 aa23.64■■□□□ 1.37
ATG4D-209ENST00000588857 CD300LGQ6UXG3 332 aa23.64■■□□□ 1.37
ATG4D-209ENST00000588857 CRYBG2Q8N1P7 616 aa23.64■■□□□ 1.37
ATG4D-209ENST00000588857 ZNF592Q92610 1267 aa23.64■■□□□ 1.37
ATG4D-209ENST00000588857 THAP2Q9H0W7 228 aa23.64■■□□□ 1.37
ATG4D-209ENST00000588857 PRG3Q9Y2Y8 225 aaPredicted RBP23.64■■□□□ 1.37
ATG4D-209ENST00000588857 NME7Q9Y5B8 376 aa23.64■■□□□ 1.37
ATG4D-209ENST00000588857 TSC2P49815 1807 aa23.63■■□□□ 1.37
ATG4D-209ENST00000588857 I3L4J1 428 aa23.63■■□□□ 1.37
ATG4D-209ENST00000588857 M0QZQ0 153 aa23.63■■□□□ 1.37
ATG4D-209ENST00000588857 ALDH2P05091 517 aa23.63■■□□□ 1.37
ATG4D-209ENST00000588857 LMO2P25791 158 aa23.63■■□□□ 1.37
ATG4D-209ENST00000588857 GPC5P78333 572 aa23.63■■□□□ 1.37
ATG4D-209ENST00000588857 C9orf50Q5SZB4 431 aa23.63■■□□□ 1.37
ATG4D-209ENST00000588857 SYT10Q6XYQ8 523 aa23.63■■□□□ 1.37
ATG4D-209ENST00000588857 OSTM1Q86WC4 334 aa23.63■■□□□ 1.37
ATG4D-209ENST00000588857 TOP1MTQ969P6 601 aa23.63■■□□□ 1.37
ATG4D-209ENST00000588857 TRIM11Q96F44 468 aa23.63■■□□□ 1.37
ATG4D-209ENST00000588857 SUSD3Q96L08 255 aa23.63■■□□□ 1.37
ATG4D-209ENST00000588857 NOX5Q96PH1 765 aa23.63■■□□□ 1.37
ATG4D-209ENST00000588857 LHX5Q9H2C1 402 aa23.63■■□□□ 1.37
ATG4D-209ENST00000588857 DPEP3Q9H4B8 488 aa23.63■■□□□ 1.37
ATG4D-209ENST00000588857 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.63■■□□□ 1.37
ATG4D-209ENST00000588857 O00370 1275 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms