RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CNKSR3Q6P9H4 555 aa27.66■■■□□ 2.02
SCAMP4-210ENST00000588555 PHF13Q86YI8 300 aaPredicted RBP27.66■■■□□ 2.02
SCAMP4-210ENST00000588555 WDTC1Q8N5D0 677 aa27.66■■■□□ 2.02
SCAMP4-210ENST00000588555 SLC35G2Q8TBE7 412 aa27.66■■■□□ 2.02
SCAMP4-210ENST00000588555 ZNF518BQ9C0D4 1074 aa27.66■■■□□ 2.02
SCAMP4-210ENST00000588555 LHX5Q9H2C1 402 aa27.66■■■□□ 2.02
SCAMP4-210ENST00000588555 STXBP5LQ9Y2K9 1186 aa27.66■■■□□ 2.02
SCAMP4-210ENST00000588555 A8MXQ7 604 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 CYP1A2P05177 515 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 LMO2P25791 158 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 GNL1P36915 607 aaPredicted RBP27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 CNGA2Q16280 664 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 DENND1BQ6P3S1 775 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 ACOT1Q86TX2 421 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 OSTM1Q86WC4 334 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 C12orf29Q8N999 325 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 CASD1Q96PB1 797 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 ALS2CR12Q96Q35 445 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 NAPGQ99747 312 aaPredicted RBP27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 OSGEPQ9NPF4 335 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 COG5Q9UP83 839 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 GABRDO14764 452 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 B3GAT3O94766 335 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 EN2P19622 333 aaPredicted RBP27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 NAP1L1P55209 391 aaKnown RBP27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 PTP4A2Q12974 167 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 TIGD5Q53EQ6 642 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 WSCD1Q658N2 575 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 PPP1R2P3Q6NXS1 205 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 COLGALT2Q8IYK4 626 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 CRYBG2Q8N1P7 616 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 TMEM35BQ8NCS4 154 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 C1orf131Q8NDD1 294 aaKnown RBP27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 TPCN2Q8NHX9 752 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 SNX25Q9H3E2 840 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 DPEP3Q9H4B8 488 aa27.65■■■□□ 2.02
SCAMP4-210ENST00000588555 LTBP2Q14767 1821 aa27.64■■■□□ 2.02
SCAMP4-210ENST00000588555 GRID2IPA4D2P6 1211 aa27.64■■■□□ 2.02
SCAMP4-210ENST00000588555 CTAGE9A4FU28 777 aa27.64■■■□□ 2.02
SCAMP4-210ENST00000588555 ATMINO43313 823 aaPredicted RBP27.64■■■□□ 2.02
SCAMP4-210ENST00000588555 HADHBP55084 474 aaKnown RBP27.64■■■□□ 2.02
SCAMP4-210ENST00000588555 DCLRE1AQ6PJP8 1040 aa27.64■■■□□ 2.02
SCAMP4-210ENST00000588555 RHOT2Q8IXI1 618 aa27.64■■■□□ 2.02
SCAMP4-210ENST00000588555 ZNF653Q96CK0 615 aa27.64■■■□□ 2.02
SCAMP4-210ENST00000588555 PRDM5Q9NQX1 630 aaPredicted RBP27.64■■■□□ 2.02
SCAMP4-210ENST00000588555 LRFN2Q9ULH4 789 aa27.64■■■□□ 2.02
SCAMP4-210ENST00000588555 TSC2P49815 1807 aa27.64■■■□□ 2.01
SCAMP4-210ENST00000588555 PALMO75781 387 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 MICAL2O94851 1124 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 MMP8P22894 467 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 PAX3P23760 479 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 NOP2P46087 812 aaKnown RBP27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 GATMP50440 423 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 IFI16Q16666 785 aaKnown RBP27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 LCLAT1Q6UWP7 414 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 NPAS4Q8IUM7 802 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 LRRC57Q8N9N7 239 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 VCPIP1Q96JH7 1222 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 F8W810 466 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 KIF4AO95239 1232 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 ITGB1P05556 798 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 PDGFRBP09619 1106 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 C1QBPQ07021 282 aaKnown RBP27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 IKBKEQ14164 716 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 PAN2Q504Q3 1202 aaKnown RBP27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 DSTYKQ6XUX3 929 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 ABI1Q8IZP0 508 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 TMEM86AQ8N2M4 240 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 TRIM11Q96F44 468 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 AVENQ9NQS1 362 aaPredicted RBP27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 CHORDC1Q9UHD1 332 aaPredicted RBP27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 CYTH4Q9UIA0 394 aa27.63■■■□□ 2.01
SCAMP4-210ENST00000588555 ENC1O14682 589 aa27.62■■■□□ 2.01
SCAMP4-210ENST00000588555 HOXA2O43364 376 aa27.62■■■□□ 2.01
SCAMP4-210ENST00000588555 MTA2O94776 668 aa27.62■■■□□ 2.01
SCAMP4-210ENST00000588555 MYBL1P10243 752 aa27.62■■■□□ 2.01
SCAMP4-210ENST00000588555 STILQ15468 1287 aa27.62■■■□□ 2.01
SCAMP4-210ENST00000588555 C2CD6Q53TS8 623 aa27.62■■■□□ 2.01
SCAMP4-210ENST00000588555 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.62■■■□□ 2.01
SCAMP4-210ENST00000588555 C11orf70Q9BRQ4 267 aa27.62■■■□□ 2.01
SCAMP4-210ENST00000588555 ADAM22Q9P0K1 906 aa27.62■■■□□ 2.01
SCAMP4-210ENST00000588555 DNAJB4Q9UDY4 337 aa27.62■■■□□ 2.01
SCAMP4-210ENST00000588555 CNOT8Q9UFF9 292 aaKnown RBP27.62■■■□□ 2.01
SCAMP4-210ENST00000588555 TSPAN16Q9UKR8 245 aa27.62■■■□□ 2.01
SCAMP4-210ENST00000588555 JRKLQ9Y4A0 524 aa27.62■■■□□ 2.01
SCAMP4-210ENST00000588555 CEP83Q9Y592 693 aa27.62■■■□□ 2.01
SCAMP4-210ENST00000588555 FNDC1Q4ZHG4 1894 aaPredicted RBP27.61■■■□□ 2.01
SCAMP4-210ENST00000588555 M0QZQ0 153 aa27.61■■■□□ 2.01
SCAMP4-210ENST00000588555 ATP1A1P05023 1023 aaKnown RBP27.61■■■□□ 2.01
SCAMP4-210ENST00000588555 CSF2RAP15509 400 aa27.61■■■□□ 2.01
SCAMP4-210ENST00000588555 BRCC3P46736 316 aa27.61■■■□□ 2.01
SCAMP4-210ENST00000588555 RNASELQ05823 741 aaKnown RBP27.61■■■□□ 2.01
SCAMP4-210ENST00000588555 PPP1R26Q5T8A7 1209 aaPredicted RBP27.61■■■□□ 2.01
SCAMP4-210ENST00000588555 MMS22LQ6ZRQ5 1243 aa27.61■■■□□ 2.01
SCAMP4-210ENST00000588555 LPIN3Q9BQK8 851 aa27.61■■■□□ 2.01
SCAMP4-210ENST00000588555 CTTNBP2NLQ9P2B4 639 aa27.61■■■□□ 2.01
SCAMP4-210ENST00000588555 TMEM189-UBE2V1I3L0A0 370 aa27.6■■■□□ 2.01
SCAMP4-210ENST00000588555 RAG1P15918 1043 aa27.6■■■□□ 2.01
SCAMP4-210ENST00000588555 RRM1P23921 792 aa27.6■■■□□ 2.01
SCAMP4-210ENST00000588555 AMPD2Q01433 879 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms