RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 HMGCRP04035 888 aa23.61■■□□□ 1.37
CIRBP-208ENST00000586548 HOXD10P28358 340 aa23.61■■□□□ 1.37
CIRBP-208ENST00000586548 KCNA10Q16322 511 aa23.61■■□□□ 1.37
CIRBP-208ENST00000586548 SGO2Q562F6 1265 aa23.61■■□□□ 1.37
CIRBP-208ENST00000586548 TWF2Q6IBS0 349 aaKnown RBP23.61■■□□□ 1.37
CIRBP-208ENST00000586548 CCSAPQ6IQ19 270 aaPredicted RBP23.61■■□□□ 1.37
CIRBP-208ENST00000586548 NT5C1AQ9BXI3 368 aa23.61■■□□□ 1.37
CIRBP-208ENST00000586548 SENP6Q9GZR1 1112 aaPredicted RBP23.61■■□□□ 1.37
CIRBP-208ENST00000586548 NR2E1Q9Y466 385 aa23.61■■□□□ 1.37
CIRBP-208ENST00000586548 BHMG1C9JSJ3 638 aaPredicted RBP23.6■■□□□ 1.37
CIRBP-208ENST00000586548 O00370 1275 aa23.6■■□□□ 1.37
CIRBP-208ENST00000586548 MICAL2O94851 1124 aa23.6■■□□□ 1.37
CIRBP-208ENST00000586548 CYP3A5P20815 502 aa23.6■■□□□ 1.37
CIRBP-208ENST00000586548 TNNT3P45378 269 aaPredicted RBP23.6■■□□□ 1.37
CIRBP-208ENST00000586548 GSCP56915 257 aaPredicted RBP23.6■■□□□ 1.37
CIRBP-208ENST00000586548 PAK2Q13177 524 aa23.6■■□□□ 1.37
CIRBP-208ENST00000586548 PTPN20Q4JDL3 420 aa23.6■■□□□ 1.37
CIRBP-208ENST00000586548 PPP1R15BQ5SWA1 713 aa23.6■■□□□ 1.37
CIRBP-208ENST00000586548 EMBQ6PCB8 327 aa23.6■■□□□ 1.37
CIRBP-208ENST00000586548 SLC13A5Q86YT5 568 aaPredicted RBP23.6■■□□□ 1.37
CIRBP-208ENST00000586548 EIF1ADQ8N9N8 165 aaKnown RBP23.6■■□□□ 1.37
CIRBP-208ENST00000586548 PCSK9Q8NBP7 692 aaKnown RBP23.6■■□□□ 1.37
CIRBP-208ENST00000586548 HEXIM2Q96MH2 286 aaKnown RBP23.6■■□□□ 1.37
CIRBP-208ENST00000586548 RNF39Q9H2S5 420 aa23.6■■□□□ 1.37
CIRBP-208ENST00000586548 VIPAS39Q9H9C1 493 aa23.6■■□□□ 1.37
CIRBP-208ENST00000586548 CREBZFQ9NS37 354 aa23.6■■□□□ 1.37
CIRBP-208ENST00000586548 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.6■■□□□ 1.37
CIRBP-208ENST00000586548 SNX9Q9Y5X1 595 aa23.6■■□□□ 1.37
CIRBP-208ENST00000586548 RPS6KA5O75582 802 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 STILQ15468 1287 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 WNT8BQ93098 351 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 ZNF560Q96MR9 790 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 KLK14Q9P0G3 267 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 CYTH4Q9UIA0 394 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 ZSCAN5CA6NGD5 496 aaPredicted RBP23.59■■□□□ 1.37
CIRBP-208ENST00000586548 PIRO00625 290 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 GJB6O95452 261 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 PNPLA4P41247 253 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 RPL7AP62424 266 aaKnown RBP23.59■■□□□ 1.37
CIRBP-208ENST00000586548 CBX1P83916 185 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 MAP3K21Q5TCX8 1036 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 RHOT1Q8IXI2 618 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 CASKIN2Q8WXE0 1202 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 DDX27Q96GQ7 796 aaKnown RBP23.59■■□□□ 1.37
CIRBP-208ENST00000586548 ERVK-5Q9HDB9 667 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 CHST12Q9NRB3 414 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 WDR35Q9P2L0 1181 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 AMACRQ9UHK6 382 aa23.59■■□□□ 1.37
CIRBP-208ENST00000586548 M0QYV0 167 aa23.58■■□□□ 1.37
CIRBP-208ENST00000586548 PHF2O75151 1096 aa23.58■■□□□ 1.37
CIRBP-208ENST00000586548 CARSP49589 748 aaKnown RBP23.58■■□□□ 1.37
CIRBP-208ENST00000586548 MGAT3Q09327 533 aa23.58■■□□□ 1.37
CIRBP-208ENST00000586548 NNTQ13423 1086 aa23.58■■□□□ 1.37
CIRBP-208ENST00000586548 DCUN1D2Q6PH85 259 aa23.58■■□□□ 1.37
CIRBP-208ENST00000586548 ADAT2Q7Z6V5 191 aaKnown RBP23.58■■□□□ 1.37
CIRBP-208ENST00000586548 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.58■■□□□ 1.374e-6■■■■□ 24.2
CIRBP-208ENST00000586548 MCEEQ96PE7 176 aa23.58■■□□□ 1.37
CIRBP-208ENST00000586548 UBXN6Q9BZV1 441 aa23.58■■□□□ 1.37
CIRBP-208ENST00000586548 ACBD3Q9H3P7 528 aa23.58■■□□□ 1.37
CIRBP-208ENST00000586548 MTUS1Q9ULD2 1270 aa23.58■■□□□ 1.37
CIRBP-208ENST00000586548 ST3GAL5Q9UNP4 418 aa23.58■■□□□ 1.37
CIRBP-208ENST00000586548 CHRNA1P02708 482 aa23.57■■□□□ 1.36
CIRBP-208ENST00000586548 CUL1Q13616 776 aa23.57■■□□□ 1.36
CIRBP-208ENST00000586548 DHX34Q14147 1143 aaKnown RBP23.57■■□□□ 1.36
CIRBP-208ENST00000586548 FBXO47Q5MNV8 452 aa23.57■■□□□ 1.36
CIRBP-208ENST00000586548 CYP4A22Q5TCH4 519 aa23.57■■□□□ 1.36
CIRBP-208ENST00000586548 LCLAT1Q6UWP7 414 aa23.57■■□□□ 1.36
CIRBP-208ENST00000586548 CD99L2Q8TCZ2 262 aa23.57■■□□□ 1.36
CIRBP-208ENST00000586548 CAVIN3Q969G5 261 aa23.57■■□□□ 1.36
CIRBP-208ENST00000586548 C18orf8Q96DM3 657 aa23.57■■□□□ 1.36
CIRBP-208ENST00000586548 MRPL45Q9BRJ2 306 aaKnown RBP23.57■■□□□ 1.36
CIRBP-208ENST00000586548 PLEKHA4Q9H4M7 779 aa23.57■■□□□ 1.36
CIRBP-208ENST00000586548 ESYT3A0FGR9 886 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 CTSHP09668 335 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 CHRNA3P32297 505 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 CYP1B1Q16678 543 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 UNC93AQ86WB7 457 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 KATNAL2Q8IYT4 538 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 NIPA2Q8N8Q9 360 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 PRELID2Q8N945 189 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 ARRDC4Q8NCT1 418 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 CPXM1Q96SM3 734 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 DDX20Q9UHI6 824 aaKnown RBP23.56■■□□□ 1.36
CIRBP-208ENST00000586548 GRIN2DO15399 1336 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 SIGLEC16A6NMB1 481 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 FSCN2O14926 492 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 TTI1O43156 1089 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 TRPA1O75762 1119 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 GPD2P43304 727 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 GABRB2P47870 512 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 APLP1P51693 650 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 TAS2R40P59535 323 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 ZNF252P-AS1Q0IIN9 211 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 GPS2Q13227 327 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 PDCLQ13371 301 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 PIGHQ14442 188 aaPredicted RBP23.56■■□□□ 1.36
CIRBP-208ENST00000586548 ZNF268Q14587 947 aaPredicted RBP23.56■■□□□ 1.36
CIRBP-208ENST00000586548 PTGISQ16647 500 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 HACE1Q8IYU2 909 aa23.56■■□□□ 1.36
CIRBP-208ENST00000586548 MAIP1Q8WWC4 291 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms