RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 WDR49Q8IV35 697 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 HS6ST3Q8IZP7 471 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 OR10T2Q8NGX3 314 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 GOLGA5Q8TBA6 731 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 SHKBP1Q8TBC3 707 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 EXOC4Q96A65 974 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 FNBP1Q96RU3 617 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 CBWD1Q9BRT8 395 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 FAM126AQ9BYI3 521 aaPredicted RBP12.1□□□□□ -0.47
ACTN4-209ENST00000586538 DNAJC25Q9H1X3 360 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 C8orf33Q9H7E9 229 aaPredicted RBP12.1□□□□□ -0.47
ACTN4-209ENST00000586538 ZNF334Q9HCZ1 680 aaPredicted RBP12.1□□□□□ -0.47
ACTN4-209ENST00000586538 HEBP1Q9NRV9 189 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 THG1LQ9NWX6 298 aaKnown RBP12.1□□□□□ -0.47
ACTN4-209ENST00000586538 GDAP2Q9NXN4 497 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 ABI2Q9NYB9 513 aaPredicted RBP12.1□□□□□ -0.47
ACTN4-209ENST00000586538 EHD2Q9NZN4 543 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 SLC27A5Q9Y2P5 690 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 ATP6V1DQ9Y5K8 247 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 A0A087X0B3 334 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 HEPACAM2A8MVW5 462 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 KINO60870 393 aaKnown RBP12.09□□□□□ -0.47
ACTN4-209ENST00000586538 KIF20AO95235 890 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 MYL1P05976 194 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 CSH1P0DML2 217 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 CSH2P0DML3 217 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 HAPLN1P10915 354 aaPredicted RBP12.09□□□□□ -0.47
ACTN4-209ENST00000586538 AVPR1AP37288 418 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 PDE6CP51160 858 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 NRLP54845 237 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 AMPD2Q01433 879 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 FCHO2Q0JRZ9 810 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 BFSP1Q12934 665 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 LRRC32Q14392 662 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 GRM2Q14416 872 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 GPR158Q5T848 1215 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 VITQ6UXI7 678 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 C4orf50Q6ZRC1 276 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 C1orf127Q8N9H9 656 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 ST13P5Q8NFI4 369 aaPredicted RBP12.09□□□□□ -0.47
ACTN4-209ENST00000586538 FAM3CQ92520 227 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 SECISBP2LQ93073 1101 aaKnown RBP12.09□□□□□ -0.47
ACTN4-209ENST00000586538 CCDC34Q96HJ3 373 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 FUBP3Q96I24 572 aaKnown RBP eCLIP12.09□□□□□ -0.47
ACTN4-209ENST00000586538 CEP295NLQ96MC4 621 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 C7orf25Q9BPX7 421 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 MTMR12Q9C0I1 747 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 PCIF1Q9H4Z3 704 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 TASP1Q9H6P5 420 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 KIF9Q9HAQ2 790 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 DDX43Q9NXZ2 648 aaKnown RBP12.09□□□□□ -0.47
ACTN4-209ENST00000586538 HSPBP1Q9NZL4 362 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 TFIP11Q9UBB9 837 aaKnown RBP12.09□□□□□ -0.47
ACTN4-209ENST00000586538 USP25Q9UHP3 1055 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 SNX9Q9Y5X1 595 aa12.09□□□□□ -0.47
ACTN4-209ENST00000586538 NUP210Q8TEM1 1887 aaPredicted RBP12.08□□□□□ -0.48
ACTN4-209ENST00000586538 SCN1AP35498 2009 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 GOLGA8IPA6NC78 632 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 GOLGA8JA6NMD2 632 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 POLR2DO15514 142 aaKnown RBP12.08□□□□□ -0.48
ACTN4-209ENST00000586538 MOSPD3O75425 235 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 VNN2O95498 520 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 SP9P0CG40 484 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 KPNA1P52294 538 aaPredicted RBP12.08□□□□□ -0.48
ACTN4-209ENST00000586538 SNRNP35Q16560 246 aaKnown RBP12.08□□□□□ -0.48
ACTN4-209ENST00000586538 CFAP221Q4G0U5 840 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 INTS6LQ5JSJ4 861 aaKnown RBP12.08□□□□□ -0.48
ACTN4-209ENST00000586538 SHC4Q6S5L8 630 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 SPATA2LQ8IUW3 424 aaPredicted RBP12.08□□□□□ -0.48
ACTN4-209ENST00000586538 ARID3BQ8IVW6 561 aaPredicted RBP12.08□□□□□ -0.48
ACTN4-209ENST00000586538 ADGRF2Q8IZF7 708 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 PDCL2Q8N4E4 241 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 CELF5Q8N6W0 485 aaKnown RBP12.08□□□□□ -0.48
ACTN4-209ENST00000586538 FSIP1Q8NA03 581 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 ZNF507Q8TCN5 953 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 ATRIPQ8WXE1 791 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 MRPS31Q92665 395 aaKnown RBP12.08□□□□□ -0.48
ACTN4-209ENST00000586538 CCDC47Q96A33 483 aaKnown RBP12.08□□□□□ -0.48
ACTN4-209ENST00000586538 CLDN23Q96B33 292 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 TMEM209Q96SK2 561 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 LRRC3Q9BY71 257 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 PLA2G2FQ9BZM2 168 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 CRISPLD1Q9H336 500 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 PDE11AQ9HCR9 933 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 INTS13Q9NVM9 706 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 PCDHGA2Q9Y5H1 932 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 PIAS3Q9Y6X2 628 aa12.08□□□□□ -0.48
ACTN4-209ENST00000586538 FAM163BP0C2L3 166 aa12.07□□□□□ -0.48
ACTN4-209ENST00000586538 GJA1P17302 382 aa12.07□□□□□ -0.48
ACTN4-209ENST00000586538 ATF6P18850 670 aa12.07□□□□□ -0.48
ACTN4-209ENST00000586538 TNNI1P19237 187 aa12.07□□□□□ -0.48
ACTN4-209ENST00000586538 TRIM21P19474 475 aaKnown RBP12.07□□□□□ -0.48
ACTN4-209ENST00000586538 TARSP26639 723 aaKnown RBP12.07□□□□□ -0.48
ACTN4-209ENST00000586538 CCR3P51677 355 aa12.07□□□□□ -0.48
ACTN4-209ENST00000586538 AP3M2P53677 418 aa12.07□□□□□ -0.48
ACTN4-209ENST00000586538 KRT85P78386 507 aa12.07□□□□□ -0.48
ACTN4-209ENST00000586538 RESP18Q5W5W9 173 aa12.07□□□□□ -0.48
ACTN4-209ENST00000586538 MAMSTRQ6ZN01 415 aa12.07□□□□□ -0.48
ACTN4-209ENST00000586538 GAREM2Q75VX8 874 aa12.07□□□□□ -0.48
ACTN4-209ENST00000586538 ASCL5Q7RTU5 278 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms