RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 PLA2G2CQ5R387 149 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 N4BP2L1Q5TBK1 243 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-225ENST00000586385 WSCD1Q658N2 575 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 ARMCX5Q6P1M9 558 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 CMTM8Q8IZV2 173 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 KCTD17Q8N5Z5 321 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 EZH1Q92800 747 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-225ENST00000586385 USP13Q92995 863 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-225ENST00000586385 TSPAN18Q96SJ8 248 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 MSTO1Q9BUK6 570 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 SH2B1Q9NRF2 756 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-225ENST00000586385 LARSQ9P2J5 1176 aaKnown RBP12.87□□□□□ -0.35
BRCA1-225ENST00000586385 KCNG1Q9UIX4 513 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-225ENST00000586385 CFAP47Q6ZTR5 3102 aa12.87□□□□□ -0.35
BRCA1-225ENST00000586385 TRDMT1O14717 391 aaKnown RBP12.86□□□□□ -0.35
BRCA1-225ENST00000586385 XPOTO43592 962 aaKnown RBP12.86□□□□□ -0.35
BRCA1-225ENST00000586385 TADA3O75528 432 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 EGFP01133 1207 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 ZNF806P0C7X5 589 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 CDC25CP30307 473 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 TUFMP49411 452 aaKnown RBP12.86□□□□□ -0.35
BRCA1-225ENST00000586385 ACOT2P49753 483 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 NLRP12P59046 1061 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 GRIN1Q05586 938 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 RUNX3Q13761 415 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 KYAT1Q16773 422 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 ARHGAP15Q53QZ3 475 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 CRELD2Q6UXH1 353 aaPredicted RBP12.86□□□□□ -0.35
BRCA1-225ENST00000586385 ITIH5Q86UX2 942 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 GPBP1Q86WP2 473 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 EFCAB13Q8IY85 973 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 FAM212AQ96EL1 285 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 LOXL4Q96JB6 756 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 CCSER1Q9C0I3 900 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 EBF3Q9H4W6 596 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 ODF2LQ9ULJ1 636 aa12.86□□□□□ -0.35
BRCA1-225ENST00000586385 NUP210Q8TEM1 1887 aaPredicted RBP12.86□□□□□ -0.35
BRCA1-225ENST00000586385 CCDC163A0A0D9SF12 145 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 H0YCG3 227 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 K7ENM7 598 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 CYB561D2O14569 222 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 RPP40O75818 363 aaKnown RBP12.85□□□□□ -0.35
BRCA1-225ENST00000586385 GTF2BQ00403 316 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 TMEM132DQ14C87 1099 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 CCDC142Q17RM4 750 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 AASDHQ4L235 1098 aaPredicted RBP12.85□□□□□ -0.35
BRCA1-225ENST00000586385 ZC2HC1CQ53FD0 456 aaPredicted RBP12.85□□□□□ -0.35
BRCA1-225ENST00000586385 RILPL1Q5EBL4 403 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 STPG1Q5TH74 334 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 TXNDC8Q6A555 127 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 TCEAL6Q6IPX3 200 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 CD302Q8IX05 232 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 MYCT1Q8N699 235 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 MAB21L3Q8N8X9 362 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 FAM200AQ8TCP9 573 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 TCEAL3Q969E4 200 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 PYM1Q9BRP8 204 aaKnown RBP12.85□□□□□ -0.35
BRCA1-225ENST00000586385 DERAQ9Y315 318 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 STYXL1Q9Y6J8 313 aa12.85□□□□□ -0.35
BRCA1-225ENST00000586385 SCN1AP35498 2009 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 ANTXRLA6NF34 631 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 TRAK2O60296 914 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 FOXD2O60548 495 aaPredicted RBP12.84□□□□□ -0.35
BRCA1-225ENST00000586385 RNF40O75150 1001 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 KCNA4P22459 653 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 PAX3P23760 479 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 ADSSP30520 456 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 SHC2P98077 582 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 DHX8Q14562 1220 aaKnown RBP12.84□□□□□ -0.35
BRCA1-225ENST00000586385 MCM6Q14566 821 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 VEPH1Q14D04 833 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 PLK5Q496M5 336 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 SDHAF4Q5VUM1 108 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 ARL6IP4Q66PJ3 421 aaKnown RBP12.84□□□□□ -0.35
BRCA1-225ENST00000586385 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 ZSWIM2Q8NEG5 633 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 ZC3H10Q96K80 434 aaKnown RBP12.84□□□□□ -0.35
BRCA1-225ENST00000586385 FAM84AQ96KN4 292 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 HHIPQ96QV1 700 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 PKMYT1Q99640 499 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 DUSP15Q9H1R2 295 aaPredicted RBP12.84□□□□□ -0.35
BRCA1-225ENST00000586385 ASB7Q9H672 318 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 PARVGQ9HBI0 331 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 THG1LQ9NWX6 298 aaKnown RBP12.84□□□□□ -0.35
BRCA1-225ENST00000586385 DPP3Q9NY33 737 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 ABI2Q9NYB9 513 aaPredicted RBP12.84□□□□□ -0.35
BRCA1-225ENST00000586385 C2CD2Q9Y426 696 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 CHD6Q8TD26 2715 aa12.84□□□□□ -0.35
BRCA1-225ENST00000586385 DCLK1O15075 740 aa12.83□□□□□ -0.36
BRCA1-225ENST00000586385 FAM13AO94988 1023 aa12.83□□□□□ -0.36
BRCA1-225ENST00000586385 PLCG1P19174 1290 aa12.83□□□□□ -0.36
BRCA1-225ENST00000586385 MPLP40238 635 aa12.83□□□□□ -0.36
BRCA1-225ENST00000586385 TAF6P49848 677 aa12.83□□□□□ -0.36
BRCA1-225ENST00000586385 GALK1P51570 392 aa12.83□□□□□ -0.36
BRCA1-225ENST00000586385 GRSF1Q12849 480 aaKnown RBP eCLIP12.83□□□□□ -0.36
BRCA1-225ENST00000586385 MCTP1Q6DN14 999 aa12.83□□□□□ -0.36
BRCA1-225ENST00000586385 IL31Q6EBC2 164 aa12.83□□□□□ -0.36
BRCA1-225ENST00000586385 MON1AQ86VX9 555 aa12.83□□□□□ -0.36
BRCA1-225ENST00000586385 CXorf38Q8TB03 319 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms