RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 FAM200AQ8TCP9 573 aa23.24■■□□□ 1.31
R3HDM4-202ENST00000586080 SYAP1Q96A49 352 aaPredicted RBP23.24■■□□□ 1.31
R3HDM4-202ENST00000586080 ACBD6Q9BR61 282 aa23.24■■□□□ 1.31
R3HDM4-202ENST00000586080 GTPBP4Q9BZE4 634 aaKnown RBP23.24■■□□□ 1.31
R3HDM4-202ENST00000586080 IGSF9Q9P2J2 1179 aa23.24■■□□□ 1.31
R3HDM4-202ENST00000586080 MAPK13O15264 365 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 TRIM49P0CI25 452 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 TRIM49CP0CI26 452 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 CEBPBP17676 345 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 TUFMP49411 452 aaKnown RBP23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 SIGLEC14Q08ET2 396 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 SMARCB1Q12824 385 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 NCOA4Q13772 614 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 ZNF699Q32M78 642 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 EDRF1Q3B7T1 1238 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 INTS6LQ5JSJ4 861 aaKnown RBP23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 INTS8Q75QN2 995 aaKnown RBP23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 NPAS3Q8IXF0 933 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 UBALD2Q8IYN6 164 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 SPPL2BQ8TCT7 592 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 C2orf15Q8WU43 125 aaKnown RBP23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 TCEAL4Q96EI5 215 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 MMRN2Q9H8L6 949 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 TMLHEQ9NVH6 421 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 PCDHB5Q9Y5E4 795 aa23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 ZFP37Q9Y6Q3 630 aaPredicted RBP23.23■■□□□ 1.31
R3HDM4-202ENST00000586080 TMEM221A6NGB7 291 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 PRR33A8MZF0 331 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 M0R296 226 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 BIN1O00499 593 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 ZNF197O14709 1029 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 CETN3O15182 167 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 C4BPAP04003 597 aaKnown RBP23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 ATICP31939 592 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 PSMC1P62191 440 aaKnown RBP23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 CLDN10P78369 228 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 TDGQ13569 410 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 VEPH1Q14D04 833 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 NFE2Q16621 373 aaPredicted RBP23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 COBLL1Q53SF7 1204 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 KBTBD7Q8WVZ9 684 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 ELMO3Q96BJ8 720 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 MCRS1Q96EZ8 462 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 SYT15Q9BQS2 421 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 MRPL45Q9BRJ2 306 aaKnown RBP23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 PI4K2AQ9BTU6 479 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 DNAJC25Q9H1X3 360 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 SNX25Q9H3E2 840 aa23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 AVENQ9NQS1 362 aaPredicted RBP23.22■■□□□ 1.31
R3HDM4-202ENST00000586080 GABRDO14764 452 aa23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 PSMA7O14818 248 aa23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 PDGFRBP09619 1106 aa23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 EPB41P11171 864 aaKnown RBP23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 WARSP23381 471 aaKnown RBP23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 CCR2P41597 374 aa23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 PIK3CAP42336 1068 aa23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 CCDC142Q17RM4 750 aa23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 SCARA5Q6ZMJ2 495 aa23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 ADSSL1Q8N142 457 aa23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 OR6B3Q8NGW1 331 aa23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 LPIN3Q9BQK8 851 aa23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 XYLT2Q9H1B5 865 aa23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 HSFX1Q9UBD0 423 aa23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 GTF3C4Q9UKN8 822 aa23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 NUMBLQ9Y6R0 609 aa23.21■■□□□ 1.31
R3HDM4-202ENST00000586080 TRIM49BA6NDI0 452 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 VNN1O95497 513 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 STAU1O95793 577 aaKnown RBP23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 HAPLN1P10915 354 aaPredicted RBP23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 GJA1P17302 382 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 LMO2P25791 158 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 GCLMP48507 274 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 PMS1P54277 932 aaKnown RBP23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 HTR4Q13639 388 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 TAF12Q16514 161 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 CAMK4Q16566 473 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 ZACNQ401N2 412 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 ZNF667Q5HYK9 610 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 PRSS36Q5K4E3 855 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 ANKRD40Q6AI12 368 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 KLHL10Q6JEL2 608 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 SV2AQ7L0J3 742 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 LIMS2Q7Z4I7 341 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 ITIH5Q86UX2 942 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 SPATA2LQ8IUW3 424 aaPredicted RBP23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 LEMD2Q8NC56 503 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 GIPC2Q8TF65 315 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 NXPE3Q969Y0 559 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 SMYD3Q9H7B4 428 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.2■■□□□ 1.32e-9■■■■■ 43
R3HDM4-202ENST00000586080 CDH9Q9ULB4 789 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 ASB3Q9Y575 518 aa23.2■■□□□ 1.3
R3HDM4-202ENST00000586080 IKBKBO14920 756 aa23.19■■□□□ 1.3
R3HDM4-202ENST00000586080 NARSO43776 548 aaKnown RBP23.19■■□□□ 1.3
R3HDM4-202ENST00000586080 ATP2C2O75185 946 aa23.19■■□□□ 1.3
R3HDM4-202ENST00000586080 ATF6P18850 670 aa23.19■■□□□ 1.3
R3HDM4-202ENST00000586080 C1orf220Q5T0J3 134 aa23.19■■□□□ 1.3
R3HDM4-202ENST00000586080 PARM1Q6UWI2 310 aa23.19■■□□□ 1.3
R3HDM4-202ENST00000586080 HFE2Q6ZVN8 426 aa23.19■■□□□ 1.3
R3HDM4-202ENST00000586080 MTSS1LQ765P7 747 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms