RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 ZNF720Q7Z2F6 126 aa21.72■■□□□ 1.07
CLPTM1-204ENST00000585961 SFR1Q86XK3 245 aa21.72■■□□□ 1.07
CLPTM1-204ENST00000585961 ZSWIM2Q8NEG5 633 aa21.72■■□□□ 1.07
CLPTM1-204ENST00000585961 LARP4BQ92615 738 aaKnown RBP21.72■■□□□ 1.07
CLPTM1-204ENST00000585961 TMLHEQ9NVH6 421 aa21.72■■□□□ 1.07
CLPTM1-204ENST00000585961 DSEQ9UL01 958 aa21.72■■□□□ 1.07
CLPTM1-204ENST00000585961 CLIC4Q9Y696 253 aa21.72■■□□□ 1.07
CLPTM1-204ENST00000585961 PDCD11Q14690 1871 aaKnown RBP21.71■■□□□ 1.07
CLPTM1-204ENST00000585961 HAPLN1P10915 354 aaPredicted RBP21.71■■□□□ 1.07
CLPTM1-204ENST00000585961 SCP2P22307 547 aa21.71■■□□□ 1.07
CLPTM1-204ENST00000585961 PAX3P23760 479 aa21.71■■□□□ 1.07
CLPTM1-204ENST00000585961 ADSSP30520 456 aa21.71■■□□□ 1.07
CLPTM1-204ENST00000585961 PXNP49023 591 aaPredicted RBP21.71■■□□□ 1.07
CLPTM1-204ENST00000585961 GPR15P49685 360 aa21.71■■□□□ 1.07
CLPTM1-204ENST00000585961 DGKKQ5KSL6 1271 aa21.71■■□□□ 1.07
CLPTM1-204ENST00000585961 EFCAB13Q8IY85 973 aa21.71■■□□□ 1.07
CLPTM1-204ENST00000585961 MAB21L3Q8N8X9 362 aa21.71■■□□□ 1.07
CLPTM1-204ENST00000585961 GCNAQ96QF7 691 aa21.71■■□□□ 1.07
CLPTM1-204ENST00000585961 FAM213AQ9BRX8 229 aa21.71■■□□□ 1.07
CLPTM1-204ENST00000585961 PI4K2AQ9BTU6 479 aa21.71■■□□□ 1.07
CLPTM1-204ENST00000585961 THG1LQ9NWX6 298 aaKnown RBP21.71■■□□□ 1.07
CLPTM1-204ENST00000585961 MAGED2Q9UNF1 606 aaPredicted RBP21.71■■□□□ 1.07
CLPTM1-204ENST00000585961 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 KPNA7A9QM74 516 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 RETP07949 1114 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 CDC25CP30307 473 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 WNT7BP56706 349 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 TRIM68Q6AZZ1 485 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 CEP68Q76N32 757 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 TTC16Q8NEE8 873 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 MSANTD3Q96H12 275 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 FAM84AQ96KN4 292 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 CNTNAP3BQ96NU0 1288 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 PANK2Q9BZ23 570 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 CNTNAP3Q9BZ76 1288 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 POLR3BQ9NW08 1133 aaPredicted RBP21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 OBP2AQ9NY56 170 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 HSFX1Q9UBD0 423 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 CCL26Q9Y258 94 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 C2CD2Q9Y426 696 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 STYXL1Q9Y6J8 313 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 NCOR2Q9Y618 2525 aa21.7■■□□□ 1.06
CLPTM1-204ENST00000585961 EXTL3O43909 919 aa21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 PRPF40AO75400 957 aaKnown RBP21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 TFAMQ00059 246 aaKnown RBP21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 ITPRIPL2Q3MIP1 535 aa21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 TXNDC8Q6A555 127 aa21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 PKN3Q6P5Z2 889 aa21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 C1orf228Q6PIY5 440 aa21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 TMEM150AQ86TG1 271 aa21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 LONP2Q86WA8 852 aa21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 CMTM8Q8IZV2 173 aa21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 NOC3LQ8WTT2 800 aaKnown RBP21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 SAAL1Q96ER3 474 aa21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 CLIC6Q96NY7 704 aa21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 CCSER1Q9C0I3 900 aa21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 EBF3Q9H4W6 596 aa21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 MRPL44Q9H9J2 332 aaKnown RBP21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 SEMA4GQ9NTN9 838 aa21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 AGAP1Q9UPQ3 857 aa21.69■■□□□ 1.06
CLPTM1-204ENST00000585961 VPS37CA5D8V6 355 aaPredicted RBP21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 GOLGA8IPA6NC78 632 aa21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 MYMKA6NI61 221 aa21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 GOLGA8JA6NMD2 632 aa21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 AXIN1O15169 862 aa21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 GDF9O60383 454 aa21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 BMP15O95972 392 aa21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 F11P03951 625 aa21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 CEBPZQ03701 1054 aaKnown RBP21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 DDR2Q16832 855 aa21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 DCP1BQ8IZD4 617 aaKnown RBP21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 SPPL2BQ8TCT7 592 aa21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 RTKNQ9BST9 563 aa21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 PCDHB5Q9Y5E4 795 aa21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 SPTBN2O15020 2390 aa21.68■■□□□ 1.06
CLPTM1-204ENST00000585961 OTOL1A6NHN0 477 aaPredicted RBP21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 HMGA1P17096 107 aaKnown RBP21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 ACAT1P24752 427 aaKnown RBP21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 POLR2BP30876 1174 aaKnown RBP21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 ABCD1P33897 745 aa21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 MCM2P49736 904 aa21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 NLRP12P59046 1061 aa21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 PLCB2Q00722 1185 aa21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 CCINQ13939 588 aa21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 POSTNQ15063 836 aa21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 CCDC6Q16204 474 aa21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 SV2CQ496J9 727 aa21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 RRAGBQ5VZM2 374 aa21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 FAM173BQ6P4H8 233 aa21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 BRAPQ7Z569 592 aa21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 FAM160A2Q8N612 972 aaPredicted RBP21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 CSGALNACT2Q8N6G5 542 aa21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 USP13Q92995 863 aaPredicted RBP21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 ST6GALNAC4Q9H4F1 302 aa21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 PCIF1Q9H4Z3 704 aa21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 FBRSL1Q9HCM7 1045 aaKnown RBP21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 HPS4Q9NQG7 708 aa21.67■■□□□ 1.06
CLPTM1-204ENST00000585961 SCN1AP35498 2009 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms