RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 F8VP50 259 aa17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 MAGEB2O15479 319 aa17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 LIASO43766 372 aa17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 TTC4O95801 387 aa17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 KRT1P04264 644 aa17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 INSRRP14616 1297 aa17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 POLR2BP30876 1174 aaKnown RBP17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 GJA5P36382 358 aa17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 SNAPC2Q13487 334 aa17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 AMHR2Q16671 573 aa17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 TAPT1Q6NXT6 567 aa17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 MFSD7Q6UXD7 560 aa17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 C1orf127Q8N9H9 656 aa17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 CCHCR1Q8TD31 782 aa17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 DDX23Q9BUQ8 820 aaKnown RBP17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 NXF1Q9UBU9 619 aaKnown RBP17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 IVNS1ABPQ9Y6Y0 642 aa17.44■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 COL1A2P08123 1366 aa17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 RBM47A0AV96 593 aaKnown RBP17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 SMIM23A6NLE4 172 aa17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 ANKRD65E5RJM6 399 aa17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 NFICP08651 508 aa17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 KRT19P08727 400 aa17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 IFI35P80217 286 aaPredicted RBP17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 PTPN20Q4JDL3 420 aa17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 LDLRAD1Q5T700 205 aa17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 SPOCD1Q6ZMY3 1216 aa17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 UHMK1Q8TAS1 419 aaKnown RBP17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 CXorf38Q8TB03 319 aa17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 EMID1Q96A84 441 aaPredicted RBP17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 SERPINB12Q96P63 405 aa17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 XPO6Q96QU8 1125 aaKnown RBP17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 FOXP3Q9BZS1 431 aa17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 VRTNQ9H8Y1 702 aa17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 VTA1Q9NP79 307 aa17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 KLHL11Q9NVR0 708 aa17.43■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 LACTBL1A8MY62 500 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 MEFVO15553 781 aaPredicted RBP17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 GH1P01241 217 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 STAG3L1P0CL83 205 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 CHN1P15882 459 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 ATICP31939 592 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 RAD23BP54727 409 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 ZNF792Q3KQV3 632 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 WDR72Q3MJ13 1102 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 HIBCHQ6NVY1 386 aaPredicted RBP17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 DENND1BQ6P3S1 775 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 MAMDC4Q6UXC1 1216 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 POLNQ7Z5Q5 900 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 PPTC7Q8NI37 304 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 MDM1Q8TC05 714 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 FNIP1Q8TF40 1166 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 FAM118BQ9BPY3 351 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 FHDC1Q9C0D6 1143 aaPredicted RBP17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 ASB7Q9H672 318 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 DRG1Q9Y295 367 aaKnown RBP17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 hCG_1818297A0A087WSY0 165 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 A0A087WZ62 844 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 SIGLEC16A6NMB1 481 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 PI4K2BG5E9Z4 385 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 TCEA3O75764 348 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 ACSL3O95573 720 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 KRT10P13645 584 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 EPHX2P34913 555 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 SLCO1A2P46721 670 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 RAP1GAPP47736 663 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 IGBP1P78318 339 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 KYAT1Q16773 422 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 EAPPQ56P03 285 aaPredicted RBP17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 TFDP3Q5H9I0 405 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 CYP4A22Q5TCH4 519 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 C9orf131Q5VYM1 1079 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 IZUMO3Q5VZ72 239 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 C6orf89Q6UWU4 347 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 CEP128Q6ZU80 1094 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 TAOK1Q7L7X3 1001 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 GPRC5AQ8NFJ5 357 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 ATXN2LQ8WWM7 1075 aaKnown RBP17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 FDXACB1Q9BRP7 624 aaPredicted RBP17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 PDZD7Q9H5P4 517 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 WDR35Q9P2L0 1181 aa17.42■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 TRIP11Q15643 1979 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 RALGAPA2Q2PPJ7 1873 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 SCN4AP35499 1836 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 CYP2C8P10632 490 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 CD19P15391 556 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 ATF7P17544 494 aaPredicted RBP17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 VPS41P49754 854 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 CCNA1P78396 465 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 KAZNQ674X7 775 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 TXNRD3NBQ6F5E7 133 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 JADE1Q6IE81 842 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 TADA2BQ86TJ2 420 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 PPM1EQ8WY54 764 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 SELENOSQ9BQE4 189 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 SDCBP2Q9H190 292 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 CCDC134Q9H6E4 229 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 CYP3A43Q9HB55 503 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 NINJ2Q9NZG7 142 aa17.41■□□□□ 0.38
APOC4-APOC2-201ENST00000585685 CYTH4Q9UIA0 394 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms