RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 CRELD2Q6UXH1 353 aaPredicted RBP16.2■□□□□ 0.18
VAPA-209ENST00000585042 TTC9BQ8N6N2 239 aa16.2■□□□□ 0.18
VAPA-209ENST00000585042 FAM200AQ8TCP9 573 aa16.2■□□□□ 0.18
VAPA-209ENST00000585042 CACTINQ8WUQ7 758 aaKnown RBP16.2■□□□□ 0.18
VAPA-209ENST00000585042 POMGNT1Q8WZA1 660 aa16.2■□□□□ 0.18
VAPA-209ENST00000585042 LRRC3BQ96PB8 259 aa16.2■□□□□ 0.18
VAPA-209ENST00000585042 PYM1Q9BRP8 204 aaKnown RBP16.2■□□□□ 0.18
VAPA-209ENST00000585042 SRPRBQ9Y5M8 271 aaKnown RBP16.2■□□□□ 0.18
VAPA-209ENST00000585042 NUP210Q8TEM1 1887 aaPredicted RBP16.19■□□□□ 0.18
VAPA-209ENST00000585042 SLC38A8A6NNN8 435 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 FOXD2O60548 495 aaPredicted RBP16.19■□□□□ 0.18
VAPA-209ENST00000585042 RETP07949 1114 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 ADSSP30520 456 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 CUL4AQ13619 759 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 ALCAMQ13740 583 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 GAS6Q14393 721 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 WSCD1Q658N2 575 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 SV2BQ7L1I2 683 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 LRRTM3Q86VH5 581 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 SPATA18Q8TC71 538 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 EPSTI1Q96J88 318 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 ZNF560Q96MR9 790 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 ACCSQ96QU6 501 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 SEPT5Q99719 369 aaPredicted RBP16.19■□□□□ 0.18
VAPA-209ENST00000585042 IL21Q9HBE4 155 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 OLFML3Q9NRN5 406 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 PCDHB13Q9Y5F0 798 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 MORC2Q9Y6X9 1032 aaPredicted RBP16.19■□□□□ 0.18
VAPA-209ENST00000585042 SCN1AP35498 2009 aa16.19■□□□□ 0.18
VAPA-209ENST00000585042 ANK1P16157 1881 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 MED19A0JLT2 244 aaPredicted RBP16.18■□□□□ 0.18
VAPA-209ENST00000585042 SOAT2O75908 522 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 ATF6P18850 670 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 GARTP22102 1010 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 TXLNAP40222 546 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 SATB1Q01826 763 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 CCINQ13939 588 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 NFE2Q16621 373 aaPredicted RBP16.18■□□□□ 0.18
VAPA-209ENST00000585042 ITPRIPL2Q3MIP1 535 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 L1TD1Q5T7N2 865 aaKnown RBP16.18■□□□□ 0.18
VAPA-209ENST00000585042 RRAGBQ5VZM2 374 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 DYMQ7RTS9 669 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 LONP2Q86WA8 852 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 SFR1Q86XK3 245 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 CMTM8Q8IZV2 173 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 LEO1Q8WVC0 666 aaPredicted RBP16.18■□□□□ 0.18
VAPA-209ENST00000585042 DNAJC19Q96DA6 116 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 LPIN3Q9BQK8 851 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 ACBD6Q9BR61 282 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 RTKNQ9BST9 563 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 SLC46A2Q9BY10 475 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 MRPL44Q9H9J2 332 aaKnown RBP16.18■□□□□ 0.18
VAPA-209ENST00000585042 GTSE1Q9NYZ3 720 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 PCDHB5Q9Y5E4 795 aa16.18■□□□□ 0.18
VAPA-209ENST00000585042 DNAH14Q0VDD8 3507 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 TISP43B9A030 160 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 K7ESF4 209 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 F11P03951 625 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 CSH1P0DML2 217 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 CSH2P0DML3 217 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 ATXN1P54253 815 aaKnown RBP16.17■□□□□ 0.18
VAPA-209ENST00000585042 AMPD2Q01433 879 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 TSPY1Q01534 308 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 USP49Q70CQ1 688 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 EFCAB13Q8IY85 973 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 TMEM86AQ8N2M4 240 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 LRRC52Q8N7C0 313 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 KIF9Q9HAQ2 790 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 ABCB6Q9NP58 842 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 FBXO2Q9UK22 296 aaPredicted RBP16.17■□□□□ 0.18
VAPA-209ENST00000585042 CDV3Q9UKY7 258 aaKnown RBP16.17■□□□□ 0.18
VAPA-209ENST00000585042 USP18Q9UMW8 372 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 CLIC4Q9Y696 253 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 TSC2P49815 1807 aa16.17■□□□□ 0.18
VAPA-209ENST00000585042 CCDC163A0A0D9SF12 145 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 MYMKA6NI61 221 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 KIAA0391O15091 583 aaKnown RBP16.16■□□□□ 0.18
VAPA-209ENST00000585042 HRO43593 1189 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 PRAMEF12O95522 483 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 HMGA1P17096 107 aaKnown RBP16.16■□□□□ 0.18
VAPA-209ENST00000585042 AVPR1AP37288 418 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 SOX9P48436 509 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 NLRP12P59046 1061 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 RPL10AP62906 217 aaKnown RBP16.16■□□□□ 0.18
VAPA-209ENST00000585042 SIM2Q14190 667 aaPredicted RBP16.16■□□□□ 0.18
VAPA-209ENST00000585042 TXNDC11Q6PKC3 985 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 CCDC73Q6ZRK6 1079 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 GPIHBP1Q8IV16 184 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 GIPC2Q8TF65 315 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 FAM83CQ9BQN1 747 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 FAM213AQ9BRX8 229 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 GKN1Q9NS71 199 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 TDP1Q9NUW8 608 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 GDAP2Q9NXN4 497 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 ABI2Q9NYB9 513 aaPredicted RBP16.16■□□□□ 0.18
VAPA-209ENST00000585042 UXTQ9UBK9 157 aaPredicted RBP16.16■□□□□ 0.18
VAPA-209ENST00000585042 ITGA11Q9UKX5 1188 aa16.16■□□□□ 0.18
VAPA-209ENST00000585042 VPS37CA5D8V6 355 aaPredicted RBP16.15■□□□□ 0.18
VAPA-209ENST00000585042 CHURC1-FNTBB4DL54 471 aa16.15■□□□□ 0.18
VAPA-209ENST00000585042 HUS1O60921 280 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms