RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 SP100P23497 879 aaPredicted RBP17.42■□□□□ 0.38
ERBB2-222ENST00000584908 FSHRP23945 695 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 PCSK1P29120 753 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 GTF2H1P32780 548 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 EPHA5P54756 1037 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 NTHL1P78549 312 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 TSPY1Q01534 308 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 TWF1Q12792 350 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 PLD1Q13393 1074 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 CAMK4Q16566 473 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 NFE2Q16621 373 aaPredicted RBP17.42■□□□□ 0.38
ERBB2-222ENST00000584908 PABPC1LQ4VXU2 614 aaKnown RBP17.42■□□□□ 0.38
ERBB2-222ENST00000584908 INTS6LQ5JSJ4 861 aaKnown RBP17.42■□□□□ 0.38
ERBB2-222ENST00000584908 TTI2Q6NXR4 508 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 TAF4BQ92750 862 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 MYADMQ96S97 322 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 HCFC1R1Q9NWW0 138 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 CEP72Q9P209 647 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 MUTYHQ9UIF7 546 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 POLIQ9UNA4 740 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 BIN1O00499 593 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 MICAL2O94851 1124 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 ASS1P00966 412 aaKnown RBP17.41■□□□□ 0.38
ERBB2-222ENST00000584908 RHOP08100 348 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 TRIM49P0CI25 452 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 TRIM49CP0CI26 452 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 TUFMP49411 452 aaKnown RBP17.41■□□□□ 0.38
ERBB2-222ENST00000584908 PPP3CAQ08209 521 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 SGSM1Q2NKQ1 1148 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 ZNF699Q32M78 642 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 FAM171BQ6P995 826 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 LEMD2Q8NC56 503 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 EEF2KMTQ96G04 330 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 CEP63Q96MT8 703 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 DUSP9Q99956 384 aaKnown RBP17.41■□□□□ 0.38
ERBB2-222ENST00000584908 DNAJC25Q9H1X3 360 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 EPHX3Q9H6B9 360 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 TMEM8AQ9HCN3 771 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 ABCB6Q9NP58 842 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 TMLHEQ9NVH6 421 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 ASB3Q9Y575 518 aa17.41■□□□□ 0.38
ERBB2-222ENST00000584908 BICDL2A1A5D9 508 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 LAMP2P13473 410 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 TNNC1P63316 161 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 PTPN21Q16825 1174 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 CFAP221Q4G0U5 840 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 ZNF667Q5HYK9 610 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 PRSS36Q5K4E3 855 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 ELMOD1Q8N336 334 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 TTC9BQ8N6N2 239 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 NELFBQ8WX92 580 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 ZNF512Q96ME7 567 aaPredicted RBP17.4■□□□□ 0.38
ERBB2-222ENST00000584908 MMS19Q96T76 1030 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 LRRC3Q9BY71 257 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 LIMD1Q9UGP4 676 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 CDH9Q9ULB4 789 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 SLC27A5Q9Y2P5 690 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 PCDHB5Q9Y5E4 795 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 TECTAO75443 2155 aa17.4■□□□□ 0.38
ERBB2-222ENST00000584908 DENND4CQ5VZ89 1909 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 STX10O60499 249 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 HLA-DRAP01903 254 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 HAPLN1P10915 354 aaPredicted RBP17.39■□□□□ 0.37
ERBB2-222ENST00000584908 ACAT1P24752 427 aaKnown RBP17.39■□□□□ 0.37
ERBB2-222ENST00000584908 LMO2P25791 158 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 GBP2P32456 591 aaPredicted RBP17.39■□□□□ 0.37
ERBB2-222ENST00000584908 ALDH1A3P47895 512 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 GCLMP48507 274 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 EPHB3P54753 998 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 SLC5A9Q2M3M2 681 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 KRT39Q6A163 491 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 IQCEQ6IPM2 695 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 GET4Q7L5D6 327 aaPredicted RBP17.39■□□□□ 0.37
ERBB2-222ENST00000584908 FILIP1Q7Z7B0 1213 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 ITFG1Q8TB96 612 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 EDAQ92838 391 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 FGF13Q92913 245 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 PSMG2Q969U7 264 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 NXPE3Q969Y0 559 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 FUBP3Q96I24 572 aaKnown RBP eCLIP17.39■□□□□ 0.37
ERBB2-222ENST00000584908 SYT15Q9BQS2 421 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 MRPL45Q9BRJ2 306 aaKnown RBP17.39■□□□□ 0.37
ERBB2-222ENST00000584908 C1QTNF1Q9BXJ1 281 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 IGSF9Q9P2J2 1179 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 GTF3C4Q9UKN8 822 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 CDH7Q9ULB5 785 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 SORCS3Q9UPU3 1222 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 NME7Q9Y5B8 376 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 GREB1Q4ZG55 1949 aa17.39■□□□□ 0.37
ERBB2-222ENST00000584908 ANHXE9PGG2 379 aa17.38■□□□□ 0.37
ERBB2-222ENST00000584908 ZNF197O14709 1029 aa17.38■□□□□ 0.37
ERBB2-222ENST00000584908 HCRTO43612 131 aa17.38■□□□□ 0.37
ERBB2-222ENST00000584908 ATF6P18850 670 aa17.38■□□□□ 0.37
ERBB2-222ENST00000584908 GNL1P36915 607 aaPredicted RBP17.38■□□□□ 0.37
ERBB2-222ENST00000584908 PAK1Q13153 545 aa17.38■□□□□ 0.37
ERBB2-222ENST00000584908 MAPRE1Q15691 268 aaKnown RBP17.38■□□□□ 0.37
ERBB2-222ENST00000584908 KLHL10Q6JEL2 608 aa17.38■□□□□ 0.37
ERBB2-222ENST00000584908 FRMD5Q7Z6J6 570 aa17.38■□□□□ 0.37
ERBB2-222ENST00000584908 NPAS3Q8IXF0 933 aa17.38■□□□□ 0.37
ERBB2-222ENST00000584908 TAS1R2Q8TE23 839 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms