RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	KAZN	Q674X7	775 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	RBM41	Q96IZ5	413 aa	Known RBP	13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	MCEE	Q96PE7	176 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ACO2	Q99798	780 aa	Known RBP	13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	L3MBTL1	Q9Y468	752 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	PRKCB	P05771	671 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	KRT10	P13645	584 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ATF7	P17544	494 aa	Predicted RBP	13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ATP5D	P30049	168 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TRPC3	Q13507	836 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CNGA2	Q16280	664 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	THEMIS2	Q5TEJ8	643 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	DNAJC24	Q6P3W2	148 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	DCUN1D2	Q6PH85	259 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TRIM50	Q86XT4	487 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ZBTB8OS	Q8IWT0	167 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	RCOR2	Q8IZ40	523 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	LRRC71	Q8N4P6	559 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TMEM35B	Q8NCS4	154 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CCDC134	Q9H6E4	229 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	NINJ2	Q9NZG7	142 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	KRT1	P04264	644 aa		13.96	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TFAM	Q00059	246 aa	Known RBP	13.96	□□□□□ -0.17
CSNK1D-222	ENST00000584377	MXD4	Q14582	209 aa	Predicted RBP	13.96	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SGSM1	Q2NKQ1	1148 aa		13.96	□□□□□ -0.17
CSNK1D-222	ENST00000584377	DLK2	Q6UY11	383 aa		13.96	□□□□□ -0.17
CSNK1D-222	ENST00000584377	PRUNE1	Q86TP1	453 aa		13.96	□□□□□ -0.17
CSNK1D-222	ENST00000584377	LRRC34	Q8IZ02	419 aa		13.96	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TCP11	Q8WWU5	503 aa		13.96	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CTNNAL1	Q9UBT7	734 aa		13.96	□□□□□ -0.17
CSNK1D-222	ENST00000584377	VIM	P08670	466 aa	Known RBP	13.96	□□□□□ -0.18
CSNK1D-222	ENST00000584377	RPS6KA3	P51812	740 aa		13.96	□□□□□ -0.18
CSNK1D-222	ENST00000584377	LMNB2	Q03252	620 aa		13.96	□□□□□ -0.18
CSNK1D-222	ENST00000584377	MCL1	Q07820	350 aa		13.96	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ZNF252P-AS1	Q0IIN9	211 aa		13.96	□□□□□ -0.18
CSNK1D-222	ENST00000584377	GPAT2	Q6NUI2	795 aa		13.96	□□□□□ -0.18
CSNK1D-222	ENST00000584377	SCARA5	Q6ZMJ2	495 aa		13.96	□□□□□ -0.18
CSNK1D-222	ENST00000584377	GADL1	Q6ZQY3	521 aa		13.96	□□□□□ -0.18
CSNK1D-222	ENST00000584377	CCDC197	Q8NCU1	140 aa		13.96	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ZNF570	Q96NI8	536 aa		13.96	□□□□□ -0.18
CSNK1D-222	ENST00000584377	SLITRK1	Q96PX8	696 aa		13.96	□□□□□ -0.18
CSNK1D-222	ENST00000584377	CPSF3	Q9UKF6	684 aa	Known RBP	13.96	□□□□□ -0.18
CSNK1D-222	ENST00000584377	PPME1	Q9Y570	386 aa		13.96	□□□□□ -0.18
CSNK1D-222	ENST00000584377	IVNS1ABP	Q9Y6Y0	642 aa		13.96	□□□□□ -0.18
CSNK1D-222	ENST00000584377		F8VP50	259 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	NOP56	O00567	594 aa	Known RBP	13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ASAP2	O43150	1006 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	TJP3	O95049	919 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ARIH2	O95376	493 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	WEE2	P0C1S8	567 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	KLRC2	P26717	231 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	SURF1	Q15526	300 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	P3H1	Q32P28	736 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	HSDL1	Q3SXM5	330 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	MFSD7	Q6UXD7	560 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ANKS4B	Q8N8V4	417 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	YIPF3	Q9GZM5	350 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	IRAK4	Q9NWZ3	460 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	CORO1C	Q9ULV4	474 aa	Predicted RBP	13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	CD2AP	Q9Y5K6	639 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	CSAD	Q9Y600	493 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	WDR90	Q96KV7	1748 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	TCRBV5S1A1T	A0A578	114 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	LIAS	O43766	372 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	GAS2	O43903	313 aa	Known RBP	13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	RIPK1	Q13546	671 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ZNF699	Q32M78	642 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	LRRC38	Q5VT99	294 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	GPC2	Q8N158	579 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	DYDC1	Q8WWB3	177 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	GPR20	Q99678	358 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ZNF518B	Q9C0D4	1074 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	SAMD15	Q9P1V8	674 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	DNPEP	Q9ULA0	475 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ZNF148	Q9UQR1	794 aa		13.95	□□□□□ -0.18
CSNK1D-222	ENST00000584377	TMEM120B	A0PK00	339 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ABLIM1	O14639	778 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	CREB1	P16220	341 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	RAB27A	P51159	221 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	OGDH	Q02218	1023 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	LRRC14	Q15048	493 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	PNMA8A	Q86V59	439 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ERICH1	Q86X53	443 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	RHPN2	Q8IUC4	686 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	THNSL1	Q8IYQ7	743 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	MGARP	Q8TDB4	240 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	TFAP2B	Q92481	460 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	C9orf72	Q96LT7	481 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ZBTB42	B2RXF5	422 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	TCEA3	O75764	348 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	PGK2	P07205	417 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	HOXC6	P09630	235 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	OSTN	P61366	133 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.94	□□□□□ -0.18	4e-7	■■■□□ 15.7
CSNK1D-222	ENST00000584377	PIGW	Q7Z7B1	504 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	CCDC63	Q8NA47	563 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	CCHCR1	Q8TD31	782 aa		13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	ZNF668	Q96K58	619 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK1D-222	ENST00000584377	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.94	□□□□□ -0.18	1e-7	■□□□□ 11.1
CSNK1D-222	ENST00000584377	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.94	□□□□□ -0.18

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