RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 ZNF197O14709 1029 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 SLC16A4O15374 487 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 EIF5BO60841 1220 aaKnown RBP8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 OR4Q2P0C623 313 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 CCNYL3P0C7X3 344 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 MCF2P10911 925 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 CPB1P15086 417 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 KCNE1P15382 129 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 PSMC3P17980 439 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 TGM1P22735 817 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 PROZP22891 400 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 SCN1AP35498 2009 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 LMNB2Q03252 620 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 MAPK7Q13164 816 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 GNL2Q13823 731 aaKnown RBP8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 TEAD2Q15562 447 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 CYP4A22Q5TCH4 519 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 TPGS2Q68CL5 300 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 IQCEQ6IPM2 695 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 MPZL3Q6UWV2 235 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 KCNK18Q7Z418 384 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 MAP4K3Q8IVH8 894 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 ELMOD1Q8N336 334 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 GPR161Q8N6U8 529 aaKnown RBP8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 C4orf32Q8N8J7 132 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 ARMC2Q8NEN0 867 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 ZSCAN18Q8TBC5 510 aaPredicted RBP8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 SMARCD2Q92925 531 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 ZBTB45Q96K62 511 aaPredicted RBP8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 SUSD3Q96L08 255 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 ZNF512Q96ME7 567 aaPredicted RBP8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 TBC1D32Q96NH3 1257 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 ACAP3Q96P50 834 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 TCHPQ9BT92 498 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 FOXP1Q9H334 677 aaPredicted RBP8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 LMAN1LQ9HAT1 526 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 ZNF334Q9HCZ1 680 aaPredicted RBP8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 KMT5AQ9NQR1 393 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 ASAH2Q9NR71 780 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 ANKFY1Q9P2R3 1169 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 AFF4Q9UHB7 1163 aaKnown RBP8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 CDV3Q9UKY7 258 aaKnown RBP8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 YIPF1Q9Y548 306 aa8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 DNMT3AQ9Y6K1 912 aaPredicted RBP8.5□□□□□ -1.05
SMCHD1-210ENST00000583800 SDK1Q7Z5N4 2213 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 DCDC2BA2VCK2 349 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 SFI1A8K8P3 1242 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 HEPACAM2A8MVW5 462 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 PRR5-ARHGAP8B1AHC4 643 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 ZNF263O14978 683 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 MICAL2O94851 1124 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 VNN2O95498 520 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 CXCL8P10145 99 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 CCNE1P24864 410 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 CDC25AP30304 524 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 RPL9P32969 192 aaKnown RBP8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 SOX9P48436 509 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 CCR3P51677 355 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 ARHGAP8P85298 464 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 SATB1Q01826 763 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 SPAG1Q07617 926 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 DMWDQ09019 674 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 RAD51AP2Q09MP3 1159 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 SPEM2Q0P670 501 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 GAS6Q14393 721 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 NOLC1Q14978 699 aaKnown RBP eCLIP8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 SLC10A6Q3KNW5 377 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 STXBP5Q5T5C0 1151 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 RINT1Q6NUQ1 792 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 PRR23BQ6ZRT6 265 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 IGSF22Q8N9C0 903 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 SHKBP1Q8TBC3 707 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 DEPDC1BQ8WUY9 529 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 RSPRY1Q96DX4 576 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 PGLYRP2Q96PD5 576 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 FAM126AQ9BYI3 521 aaPredicted RBP8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 CRISPLD1Q9H336 500 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 SLITRK6Q9H5Y7 841 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 RBM12Q9NTZ6 932 aaKnown RBP8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 EVA1BQ9NVM1 165 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 SEPT3Q9UH03 358 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 NOL7Q9UMY1 257 aaKnown RBP8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 PCDHB6Q9Y5E3 794 aa8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 TIMM13Q9Y5L4 95 aaPredicted RBP8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.49□□□□□ -1.05
SMCHD1-210ENST00000583800 ACACBO00763 2458 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 MAP1BP46821 2468 aaKnown RBP8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 EPG5Q9HCE0 2579 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 A0A1W2PRU2 124 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 SLC38A8A6NNN8 435 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 ARNTLO00327 626 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 KRT37O76014 449 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 CHRNB1P11230 501 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 SDHBP21912 280 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 TRAPPC10P48553 1259 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 TOB1P50616 345 aaPredicted RBP8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 GUCY2FP51841 1108 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 EPHA5P54756 1037 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 NRLP54845 237 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 YWHAHQ04917 246 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms