RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 TRIM32Q13049 653 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 MAMLD1Q13495 774 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 PTGISQ16647 500 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 SV2CQ496J9 727 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 LCE2DQ5TA82 110 aaPredicted RBP10.84□□□□□ -0.67
IFT20-213ENST00000583796 SEL1L2Q5TEA6 688 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 MMS22LQ6ZRQ5 1243 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 ERICH1Q86X53 443 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 NIPA2Q8N8Q9 360 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 CD99L2Q8TCZ2 262 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 WHAMMQ8TF30 809 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 MAIP1Q8WWC4 291 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 GLT1D1Q96MS3 346 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 ZMAT2Q96NC0 199 aaKnown RBP10.84□□□□□ -0.67
IFT20-213ENST00000583796 PNKPQ96T60 521 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 GOLPH3Q9H4A6 298 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 UBN1Q9NPG3 1134 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 FAM105AQ9NUU6 356 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.84□□□□□ -0.67
IFT20-213ENST00000583796 GIT1Q9Y2X7 761 aa10.84□□□□□ -0.67
IFT20-213ENST00000583796 TCRBV5S1A1TA0A578 114 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 O00370 1275 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 FKTNO75072 461 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 CHRNA1P02708 482 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 TAF6P49848 677 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 DNA2P51530 1060 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 ACLYP53396 1101 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 ITGA7Q13683 1181 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 PIGHQ14442 188 aaPredicted RBP10.83□□□□□ -0.68
IFT20-213ENST00000583796 ZNF394Q53GI3 561 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 LRRC38Q5VT99 294 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 DNAJC24Q6P3W2 148 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 LCLAT1Q6UWP7 414 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 LIMS2Q7Z4I7 341 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 MAATS1Q7Z4T9 603 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 PASD1Q8IV76 773 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 SMG8Q8ND04 991 aaKnown RBP10.83□□□□□ -0.68
IFT20-213ENST00000583796 C1orf131Q8NDD1 294 aaKnown RBP10.83□□□□□ -0.68
IFT20-213ENST00000583796 CCDC26Q8TAB7 109 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 FEZF2Q8TBJ5 459 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 SPATA18Q8TC71 538 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 IPO4Q8TEX9 1081 aaKnown RBP10.83□□□□□ -0.68
IFT20-213ENST00000583796 TFAP2BQ92481 460 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 MS4A14Q96JA4 679 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 ELOVL4Q9GZR5 314 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 SDCBP2Q9H190 292 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 HMX1Q9NP08 348 aaPredicted RBP10.83□□□□□ -0.68
IFT20-213ENST00000583796 PARP2Q9UGN5 583 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 ST3GAL5Q9UNP4 418 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 NOD1Q9Y239 953 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 FRMPD3Q5JV73 1810 aa10.83□□□□□ -0.68
IFT20-213ENST00000583796 KPNA7A9QM74 516 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 KRIT1O00522 736 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 SNPHO15079 494 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 FGGP02679 453 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 RAP1GAPP47736 663 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 GABRB2P47870 512 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 NDST1P52848 882 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 VSNL1P62760 191 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 CAP1Q01518 475 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 PAK2Q13177 524 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 ZNF268Q14587 947 aaPredicted RBP10.82□□□□□ -0.68
IFT20-213ENST00000583796 ACAP1Q15027 740 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 PPP1R15BQ5SWA1 713 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 DCAF12L1Q5VU92 463 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 ARHGAP17Q68EM7 881 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 SCARA3Q6AZY7 606 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 MRPL10Q7Z7H8 261 aaKnown RBP10.82□□□□□ -0.68
IFT20-213ENST00000583796 ZDHHC17Q8IUH5 632 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 RHOT1Q8IXI2 618 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 IFT20Q8IY31 132 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 TOP6BLQ8N6T0 577 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 ARRDC4Q8NCT1 418 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 STK32AQ8WU08 396 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 ALG3Q92685 438 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 PPP1R10Q96QC0 940 aaKnown RBP10.82□□□□□ -0.68
IFT20-213ENST00000583796 ERVK-5Q9HDB9 667 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 CYLDQ9NQC7 956 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 TUBGCP4Q9UGJ1 667 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 MTUS1Q9ULD2 1270 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 HES2Q9Y543 173 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 SNX9Q9Y5X1 595 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 TRIP11Q15643 1979 aa10.82□□□□□ -0.68
IFT20-213ENST00000583796 TMEM191CA6NGB0 347 aa10.81□□□□□ -0.68
IFT20-213ENST00000583796 SIGLEC16A6NMB1 481 aa10.81□□□□□ -0.68
IFT20-213ENST00000583796 INHAP05111 366 aa10.81□□□□□ -0.68
IFT20-213ENST00000583796 CFHP08603 1231 aa10.81□□□□□ -0.68
IFT20-213ENST00000583796 ITGA4P13612 1032 aa10.81□□□□□ -0.68
IFT20-213ENST00000583796 AKAP5P24588 427 aa10.81□□□□□ -0.68
IFT20-213ENST00000583796 THPOP40225 353 aa10.81□□□□□ -0.68
IFT20-213ENST00000583796 CETN2P41208 172 aa10.81□□□□□ -0.68
IFT20-213ENST00000583796 CDH8P55286 799 aa10.81□□□□□ -0.68
IFT20-213ENST00000583796 CUL1Q13616 776 aa10.81□□□□□ -0.68
IFT20-213ENST00000583796 DHX34Q14147 1143 aaKnown RBP10.81□□□□□ -0.68
IFT20-213ENST00000583796 LONRF2Q1L5Z9 754 aa10.81□□□□□ -0.68
IFT20-213ENST00000583796 TRIM71Q2Q1W2 868 aaKnown RBP10.81□□□□□ -0.68
IFT20-213ENST00000583796 BEND6Q5SZJ8 279 aaPredicted RBP10.81□□□□□ -0.68
IFT20-213ENST00000583796 EMBQ6PCB8 327 aa10.81□□□□□ -0.68
IFT20-213ENST00000583796 HDXQ7Z353 690 aa10.81□□□□□ -0.68
IFT20-213ENST00000583796 SLC43A3Q8NBI5 491 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms