RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 MTMR10Q9NXD2 777 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 EHD2Q9NZN4 543 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 CEP72Q9P209 647 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 CACNG4Q9UBN1 327 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 LAMA3Q16787 3333 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 MYO9BQ13459 2157 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 A0A1W2PQJ5 194 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 F8W810 466 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 I3L4J1 428 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 TEX28O15482 410 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 CLSTN1O94985 981 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 GLUD1P00367 558 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 HNRNPA1P09651 372 aaKnown RBP eCLIP9.93□□□□□ -0.82
UBBP4-201ENST00000583708 WEE2P0C1S8 567 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 UCHL3P15374 230 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 PTPN1P18031 435 aaKnown RBP9.93□□□□□ -0.82
UBBP4-201ENST00000583708 OR1D2P34982 312 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 MAGEA11P43364 429 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 CFAP221Q4G0U5 840 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 PLPP4Q5VZY2 271 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 VSTM1Q6UX27 236 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 UBR7Q8N806 425 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 RNF214Q8ND24 703 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 CMASQ8NFW8 434 aaPredicted RBP9.93□□□□□ -0.82
UBBP4-201ENST00000583708 GDPD5Q8WTR4 605 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 SLC22A17Q8WUG5 538 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 TMEM176AQ96HP8 235 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 MRFAP1L1Q96HT8 127 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 PCMTD1Q96MG8 357 aaPredicted RBP9.93□□□□□ -0.82
UBBP4-201ENST00000583708 NAP1L5Q96NT1 182 aaPredicted RBP9.93□□□□□ -0.82
UBBP4-201ENST00000583708 CDX2Q99626 313 aaPredicted RBP9.93□□□□□ -0.82
UBBP4-201ENST00000583708 CRACR2AQ9BSW2 395 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 PI4K2AQ9BTU6 479 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 NAA15Q9BXJ9 866 aaKnown RBP9.93□□□□□ -0.82
UBBP4-201ENST00000583708 UBXN6Q9BZV1 441 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 RBSNQ9H1K0 784 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 IFNKQ9P0W0 207 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 DNAJC12Q9UKB3 198 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 ASB3Q9Y575 518 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 PCDHB5Q9Y5E4 795 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 CHD7Q9P2D1 2997 aa9.93□□□□□ -0.82
UBBP4-201ENST00000583708 SCN1AP35498 2009 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 EPOPA6NHQ4 379 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 MED7O43513 233 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 CLASP2O75122 1294 aaKnown RBP9.92□□□□□ -0.82
UBBP4-201ENST00000583708 TPM1P09493 284 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 VDRP11473 427 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 CPB1P15086 417 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 ACO1P21399 889 aaKnown RBP9.92□□□□□ -0.82
UBBP4-201ENST00000583708 IGFBP6P24592 240 aaPredicted RBP9.92□□□□□ -0.82
UBBP4-201ENST00000583708 PBX1P40424 430 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 STAT1P42224 750 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 CLCN4P51793 760 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 NDST1P52848 882 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 SLC8A3P57103 927 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 RPL10AP62906 217 aaKnown RBP9.92□□□□□ -0.82
UBBP4-201ENST00000583708 ROR1Q01973 937 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 PTK2Q05397 1052 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 ARHGAP17Q68EM7 881 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 SPOPLQ6IQ16 392 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 DPY19L2P1Q6NXN4 242 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 CACNA2D4Q7Z3S7 1137 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 GAS2L3Q86XJ1 694 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 ZNF677Q86XU0 584 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 FAM71AQ8IYT1 594 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 B3GALNT2Q8NCR0 500 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 SYN2Q92777 582 aaPredicted RBP9.92□□□□□ -0.82
UBBP4-201ENST00000583708 HNRNPABQ99729 332 aaKnown RBP9.92□□□□□ -0.82
UBBP4-201ENST00000583708 RTP3Q9BQQ7 232 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 SYT15Q9BQS2 421 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 MRPL45Q9BRJ2 306 aaKnown RBP9.92□□□□□ -0.82
UBBP4-201ENST00000583708 LSM14BQ9BX40 385 aaKnown RBP9.92□□□□□ -0.82
UBBP4-201ENST00000583708 TRIM5Q9C035 493 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 ELOVL4Q9GZR5 314 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 SMYD3Q9H7B4 428 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 SIX2Q9NPC8 291 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 COMMD8Q9NX08 183 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 ZDHHC7Q9NXF8 308 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 POLIQ9UNA4 740 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 PCDHB4Q9Y5E5 795 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 TIMM13Q9Y5L4 95 aaPredicted RBP9.92□□□□□ -0.82
UBBP4-201ENST00000583708 CDY1Q9Y6F8 540 aa9.92□□□□□ -0.82
UBBP4-201ENST00000583708 NLRC5Q86WI3 1866 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 GBF1Q92538 1859 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 HIDE1A8MVS5 230 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 C2CD2LO14523 706 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 TEX33O43247 280 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 IGFBP4P22692 258 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 IRS1P35568 1242 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 ALDH1A3P47895 512 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 ZNF132P52740 706 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 RAD23BP54727 409 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 CDH8P55286 799 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 SNX16P57768 344 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 LRMPQ12912 555 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 ADAM15Q13444 863 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 KCNC3Q14003 757 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 ADGRE1Q14246 886 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 CNGA2Q16280 664 aa9.91□□□□□ -0.82
UBBP4-201ENST00000583708 CTC1Q2NKJ3 1217 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms