RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 OBP2AQ9NY56 170 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 TBC1D7Q9P0N9 293 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 ZMYM5Q9UJ78 669 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 USP18Q9UMW8 372 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 R3HCC1Q9Y3T6 440 aaKnown RBP9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 PCDHB5Q9Y5E4 795 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 SRPRBQ9Y5M8 271 aaKnown RBP9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 STYXL1Q9Y6J8 313 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 SCN1AP35498 2009 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 MYMKA6NI61 221 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 SHISA7A6NL88 538 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 SPECC1L-ADORA2AF8WAN1 911 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 HUS1O60921 280 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 PRAMEF12O95522 483 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 KRT19P08727 400 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 POLR2BP30876 1174 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 CTHP32929 405 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 AVPR1AP37288 418 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 SOX9P48436 509 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 CDR1P51861 262 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 MYL7Q01449 175 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 LMNB2Q03252 620 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 RESTQ13127 1097 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 PTPAQ15257 358 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 NFE2Q16621 373 aaPredicted RBP9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 DGKKQ5KSL6 1271 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 WSCD1Q658N2 575 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 FAM173BQ6P4H8 233 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 PRR23BQ6ZRT6 265 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 USP49Q70CQ1 688 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 GAREM2Q75VX8 874 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 GIPC2Q8TF65 315 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 CACTINQ8WUQ7 758 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 NELL1Q92832 810 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 RSPRY1Q96DX4 576 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 ZFYVE19Q96K21 471 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 CLIC6Q96NY7 704 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 MKNK1Q9BUB5 465 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 IKZF4Q9H2S9 585 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 TASP1Q9H6P5 420 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 TMEM206Q9H813 350 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 KIF9Q9HAQ2 790 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 THG1LQ9NWX6 298 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 GTSE1Q9NYZ3 720 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 ITGA11Q9UKX5 1188 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 PCDHB13Q9Y5F0 798 aa9.38□□□□□ -0.91
CDK5RAP3-229ENST00000583697 CACNA1HO95180 2353 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 HELZP42694 1942 aaKnown RBP9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 DENND4CQ5VZ89 1909 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 MYBPHLA2RUH7 354 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 PRPF40AO75400 957 aaKnown RBP9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 HAPLN1P10915 354 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 CHRNB1P11230 501 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 SYT1P21579 422 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 SDHBP21912 280 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 GARTP22102 1010 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 DDX6P26196 483 aaKnown RBP eCLIP9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 CXCL12P48061 93 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 CASP5P51878 434 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 SATB1Q01826 763 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 KCNA1Q09470 495 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 FZD5Q13467 585 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 CRELD2Q6UXH1 353 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 Q6ZS52 159 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 GPIHBP1Q8IV16 184 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 CCDC65Q8IXS2 484 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 ZNF687Q8N1G0 1237 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 TMEM86AQ8N2M4 240 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 CELF5Q8N6W0 485 aaKnown RBP9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 LRRC52Q8N7C0 313 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 TTC8Q8TAM2 541 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 LEO1Q8WVC0 666 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 MRPS31Q92665 395 aaKnown RBP9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 DNAJC19Q96DA6 116 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 ANKRD36BP1Q96IX9 119 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 USP28Q96RU2 1077 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 PI4K2AQ9BTU6 479 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 ZSCAN16Q9H4T2 348 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 RBM12Q9NTZ6 932 aaKnown RBP9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 PANK4Q9NVE7 773 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 DDX43Q9NXZ2 648 aaKnown RBP9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 UXTQ9UBK9 157 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 CDV3Q9UKY7 258 aaKnown RBP9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 MAGED2Q9UNF1 606 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 AGAP1Q9UPQ3 857 aa9.37□□□□□ -0.91
CDK5RAP3-229ENST00000583697 DNAH14Q0VDD8 3507 aa9.36□□□□□ -0.91
CDK5RAP3-229ENST00000583697 ZNF638Q14966 1978 aaKnown RBP9.36□□□□□ -0.91
CDK5RAP3-229ENST00000583697 GOLGA8IPA6NC78 632 aa9.36□□□□□ -0.91
CDK5RAP3-229ENST00000583697 GOLGA8JA6NMD2 632 aa9.36□□□□□ -0.91
CDK5RAP3-229ENST00000583697 KIAA0391O15091 583 aaKnown RBP9.36□□□□□ -0.91
CDK5RAP3-229ENST00000583697 EXTL3O43909 919 aa9.36□□□□□ -0.91
CDK5RAP3-229ENST00000583697 TNNC2P02585 160 aa9.36□□□□□ -0.91
CDK5RAP3-229ENST00000583697 CSH1P0DML2 217 aa9.36□□□□□ -0.91
CDK5RAP3-229ENST00000583697 CSH2P0DML3 217 aa9.36□□□□□ -0.91
CDK5RAP3-229ENST00000583697 WEE1P30291 646 aa9.36□□□□□ -0.91
CDK5RAP3-229ENST00000583697 ADSSP30520 456 aa9.36□□□□□ -0.91
CDK5RAP3-229ENST00000583697 RPL10AP62906 217 aaKnown RBP9.36□□□□□ -0.91
CDK5RAP3-229ENST00000583697 PON2Q15165 354 aa9.36□□□□□ -0.91
CDK5RAP3-229ENST00000583697 STK38Q15208 465 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms