RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 SETXQ7Z333 2677 aaKnown RBP12.79□□□□□ -0.36
GGA3-217ENST00000583667 BTNL10A8MVZ5 291 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 KRT86O43790 486 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 STAU1O95793 577 aaKnown RBP12.79□□□□□ -0.36
GGA3-217ENST00000583667 ASS1P00966 412 aaKnown RBP12.79□□□□□ -0.36
GGA3-217ENST00000583667 ADRB1P08588 477 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 SDHBP21912 280 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 TBXAS1P24557 533 aaPredicted RBP12.79□□□□□ -0.36
GGA3-217ENST00000583667 MAGEA1P43355 309 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 MRPS6P82932 125 aaKnown RBP12.79□□□□□ -0.36
GGA3-217ENST00000583667 KIF5AQ12840 1032 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 NAB2Q15742 525 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 SGSM1Q2NKQ1 1148 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 SLC10A6Q3KNW5 377 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 FAM26DQ5JW98 314 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 CATSPER4Q7RTX7 472 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 ZNF571Q7Z3V5 609 aaPredicted RBP12.79□□□□□ -0.36
GGA3-217ENST00000583667 THNSL1Q8IYQ7 743 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 RNF10Q8N5U6 811 aaKnown RBP12.79□□□□□ -0.36
GGA3-217ENST00000583667 OR5B17Q8NGF7 314 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 ZNF668Q96K58 619 aaPredicted RBP12.79□□□□□ -0.36
GGA3-217ENST00000583667 SCLT1Q96NL6 688 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 DEF6Q9H4E7 631 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 VRTNQ9H8Y1 702 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 CHST12Q9NRB3 414 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 MYO10Q9HD67 2058 aa12.79□□□□□ -0.36
GGA3-217ENST00000583667 A0A087X0T9 212 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 C2CD4DB7Z1M9 353 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 MEFVO15553 781 aaPredicted RBP12.78□□□□□ -0.36
GGA3-217ENST00000583667 KIF5CO60282 957 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 LRRN2O75325 713 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 CSDE1O75534 798 aaKnown RBP12.78□□□□□ -0.36
GGA3-217ENST00000583667 TNNC2P02585 160 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 ASGR2P07307 311 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 FAM228BP0C875 321 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 ATICP31939 592 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 BPIFB4P59827 614 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 MGAT3Q09327 533 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 NCOA4Q13772 614 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 TMEM132AQ24JP5 1023 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 ARHGAP29Q52LW3 1261 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 SEZ6Q53EL9 994 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 TDRD12Q587J7 1177 aaKnown RBP12.78□□□□□ -0.36
GGA3-217ENST00000583667 XKR4Q5GH76 650 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 DNTTIP2Q5QJE6 756 aaKnown RBP12.78□□□□□ -0.36
GGA3-217ENST00000583667 SYCE2Q6PIF2 218 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 ALKAL1Q6UXT8 129 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 TMEM184AQ6ZMB5 413 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 OLIG1Q8TAK6 271 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 APBB2Q92870 758 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 TATDN2Q93075 761 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 ACAP3Q96P50 834 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 OSMRQ99650 979 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 RTP3Q9BQQ7 232 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 APOL5Q9BWW9 433 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 ADAMTS1Q9UHI8 967 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 NAGPAQ9UK23 515 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 TRPV2Q9Y5S1 764 aa12.78□□□□□ -0.36
GGA3-217ENST00000583667 MRPL42Q9Y6G3 142 aaKnown RBP12.78□□□□□ -0.36
GGA3-217ENST00000583667 DCDC2BA2VCK2 349 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 LACTBL1A8MY62 500 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 DGKIO75912 1065 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 CST3P01034 146 aaPredicted RBP12.77□□□□□ -0.37
GGA3-217ENST00000583667 CTSHP09668 335 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 HARSP12081 509 aaKnown RBP12.77□□□□□ -0.37
GGA3-217ENST00000583667 ACO1P21399 889 aaKnown RBP12.77□□□□□ -0.37
GGA3-217ENST00000583667 GFPT1Q06210 699 aaPredicted RBP12.77□□□□□ -0.37
GGA3-217ENST00000583667 TUBB2AQ13885 445 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 KCNC3Q14003 757 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 TCEAL1Q15170 157 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 ZBTB6Q15916 424 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 DUSP6Q16828 381 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 ANKRD54Q6NXT1 300 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 KIAA1328Q86T90 577 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 ZNF677Q86XU0 584 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 EFCAB13Q8IY85 973 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 PPM1KQ8N3J5 372 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 UBR7Q8N806 425 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 CEP120Q8N960 986 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 CXorf38Q8TB03 319 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 MICAL1Q8TDZ2 1067 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 UBE2Q2Q8WVN8 375 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 ANKRD36BP1Q96IX9 119 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 CPB2Q96IY4 423 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 TUBB2BQ9BVA1 445 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 CCDC94Q9BW85 323 aaPredicted RBP12.77□□□□□ -0.37
GGA3-217ENST00000583667 TRAIPQ9BWF2 469 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 LACRTQ9GZZ8 138 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 C1orf112Q9NSG2 853 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 CDH22Q9UJ99 828 aa12.77□□□□□ -0.37
GGA3-217ENST00000583667 RCCD1A6NED2 376 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 M0QZ92 97 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 DDX3XO00571 662 aaKnown RBP eCLIP12.76□□□□□ -0.37
GGA3-217ENST00000583667 ENPP3O14638 875 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 PHACTR2O75167 634 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 CXCL8P10145 99 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 GZMAP12544 262 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 PIK3CAP42336 1068 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 GNG11P61952 73 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 CYP27A1Q02318 531 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms