RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 GCLCP48506 637 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 RABGGTBP53611 331 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 KCTD2Q14681 263 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SMAD1Q15797 465 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PRAMEF19Q5SWL8 479 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 AGBL2Q5U5Z8 902 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 C9orf131Q5VYM1 1079 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ANKRD22Q5VYY1 191 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TRNP1Q6NT89 227 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TADA2BQ86TJ2 420 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 RHOT1Q8IXI2 618 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 HSPH1Q92598 858 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SEC16BQ96JE7 1060 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 IMPG2Q9BZV3 1241 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 NIF3L1Q9GZT8 377 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 KCNK9Q9NPC2 374 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 AVENQ9NQS1 362 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 GPATCH2LQ9NWQ4 482 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CACNG4Q9UBN1 327 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ZNF148Q9UQR1 794 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 NEU2Q9Y3R4 380 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 BPTFQ12830 3046 aa11.31□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TCRBV5S1A1TA0A578 114 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PODXLO00592 558 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 STAM2O75886 525 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 IGFBP6P24592 240 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 RFC5P40937 340 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MAGEA9P43362 315 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 FNTAP49354 379 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 GPS1Q13098 491 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 DUOXA2Q1HG44 320 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 C15orf59Q2T9L4 293 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CCDC62Q6P9F0 684 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ENOSF1Q7L5Y1 443 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CPLX4Q7Z7G2 160 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PHF13Q86YI8 300 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SRRM1Q8IYB3 904 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CCDC13Q8IYE1 715 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 EIF1ADQ8N9N8 165 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 C12orf50Q8NA57 414 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SNF8Q96H20 258 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ELAC2Q9BQ52 826 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CDHR5Q9HBB8 845 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 KIAA1586Q9HCI6 787 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 GJD2Q9UKL4 321 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 VIMP08670 466 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 STAG3L1P0CL83 205 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 RARGP13631 454 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 POLR2BP30876 1174 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ARSEP51690 589 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 LACTBP83111 547 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MCL1Q07820 350 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PTK6Q13882 451 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 KIZQ2M2Z5 673 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CDCA2Q69YH5 1023 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MPZL3Q6UWV2 235 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ARMCX2Q7L311 632 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ERICH1Q86X53 443 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 WDR49Q8IV35 697 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 APOL6Q9BWW8 343 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 FAM49AQ9H0Q0 323 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TSPYL1Q9H0U9 437 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TMEM134Q9H6X4 195 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PTPRHQ9HD43 1115 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SAYSD1Q9NPB0 183 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ADARB2Q9NS39 739 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PARVAQ9NVD7 372 aa11.3□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SCN1AP35498 2009 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 POC1B-GALNT4F8VUJ3 575 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 LIASO43766 372 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 C22orf31O95567 290 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PECAM1P16284 738 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TFE3P19532 575 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PSMA2P25787 234 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 RAD23BP54727 409 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 DRG2P55039 364 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PSMC1P62191 440 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TMED2Q15363 201 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MSS51Q4VC12 460 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 VSTM1Q6UX27 236 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SPOCD1Q6ZMY3 1216 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ZNF365Q70YC5 407 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ZBTB8OSQ8IWT0 167 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 OTUD6BQ8N6M0 293 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ARHGEF2Q92974 986 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 VTI1AQ96AJ9 217 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PAIP2Q9BPZ3 127 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 FAM49BQ9NUQ9 324 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 AGTPBP1Q9UPW5 1226 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 NME7Q9Y5B8 376 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TMEM120BA0PK00 339 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 LDHAP00338 332 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ARF4P18085 180 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 KLRC2P26717 231 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MMP13P45452 471 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 IREB2P48200 963 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ATXN1P54253 815 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ERMARDQ5T6L9 678 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms