RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 SPATA31D4Q6ZUB0 917 aa12.9□□□□□ -0.34
SNRPD1-204ENST00000582475 OSTM1Q86WC4 334 aa12.9□□□□□ -0.34
SNRPD1-204ENST00000582475 ADGRF2Q8IZF7 708 aa12.9□□□□□ -0.34
SNRPD1-204ENST00000582475 EHBP1Q8NDI1 1231 aa12.9□□□□□ -0.34
SNRPD1-204ENST00000582475 VN1R2Q8NFZ6 395 aa12.9□□□□□ -0.34
SNRPD1-204ENST00000582475 TATDN2Q93075 761 aa12.9□□□□□ -0.34
SNRPD1-204ENST00000582475 HLA-CQ95604 372 aa12.9□□□□□ -0.34
SNRPD1-204ENST00000582475 RTP3Q9BQQ7 232 aa12.9□□□□□ -0.34
SNRPD1-204ENST00000582475 MRPL45Q9BRJ2 306 aaKnown RBP12.9□□□□□ -0.34
SNRPD1-204ENST00000582475 TUBGCP2Q9BSJ2 902 aa12.9□□□□□ -0.34
SNRPD1-204ENST00000582475 IMPG2Q9BZV3 1241 aa12.9□□□□□ -0.34
SNRPD1-204ENST00000582475 APOBEC3GQ9HC16 384 aaKnown RBP12.9□□□□□ -0.34
SNRPD1-204ENST00000582475 DDX43Q9NXZ2 648 aaKnown RBP12.9□□□□□ -0.34
SNRPD1-204ENST00000582475 COG5Q9UP83 839 aa12.9□□□□□ -0.34
SNRPD1-204ENST00000582475 ABLIM3O94929 683 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 GLP2RO95838 553 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 PDGFRBP09619 1106 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 OR4Q2P0C623 313 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 SRGAP2BP0DMP2 458 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 PRKCSHP14314 528 aaPredicted RBP12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 CDK11BP21127 795 aaKnown RBP12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 EEF1GP26641 437 aaKnown RBP12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 CDH8P55286 799 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 NOP14P78316 857 aaKnown RBP12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 ROR1Q01973 937 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 DLX2Q07687 328 aaPredicted RBP12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 GPR17Q13304 367 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 VWA3BQ502W6 1294 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 CDKAL1Q5VV42 579 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 AOPEPQ8N6M6 819 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 KREMEN2Q8NCW0 462 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 OR6B3Q8NGW1 331 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 ZNF461Q8TAF7 563 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 HDAC7Q8WUI4 952 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 KBTBD7Q8WVZ9 684 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 TMEM209Q96SK2 561 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 ACBD6Q9BR61 282 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 SNX25Q9H3E2 840 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 UBE2ZQ9H832 354 aaPredicted RBP12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 PRDM6Q9NQX0 595 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 DPP7Q9UHL4 492 aa12.89□□□□□ -0.35
SNRPD1-204ENST00000582475 TRANK1O15050 2925 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 WDR27A2RRH5 827 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 BECN2A8MW95 431 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 CAVIN2O95810 425 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 WEE2P0C1S8 567 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 CPB1P15086 417 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 LMO2P25791 158 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 PCSK1P29120 753 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 ELF1P32519 619 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 TSPY1Q01534 308 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 LRMPQ12912 555 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 IQCB1Q15051 598 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 TPGS2Q68CL5 300 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 ANKRD54Q6NXT1 300 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 RNF19BQ6ZMZ0 732 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 LRRTM3Q86VH5 581 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 DHX40Q8IX18 779 aaKnown RBP12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 DCP1BQ8IZD4 617 aaKnown RBP12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 OR10T2Q8NGX3 314 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 LMO3Q8TAP4 145 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 FAXDC2Q96IV6 333 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 ZCWPW1Q9H0M4 648 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 SDCBP2Q9H190 292 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 PLEKHA4Q9H4M7 779 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 CYP3A43Q9HB55 503 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 CBX8Q9HC52 389 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 CLEC1BQ9P126 229 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 AFF4Q9UHB7 1163 aaKnown RBP12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 BARX2Q9UMQ3 279 aaPredicted RBP12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 ATG2AQ2TAZ0 1938 aa12.88□□□□□ -0.35
SNRPD1-204ENST00000582475 A8MXQ7 604 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 PES1O00541 588 aaKnown RBP12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 HCRTO43612 131 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 ATF2P15336 505 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 HOXB8P17481 243 aaPredicted RBP12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 KCNA5P22460 613 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 ACAT1P24752 427 aaKnown RBP12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 RAP1GAPP47736 663 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 ADCY1Q08828 1119 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 UVSSAQ2YD98 709 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 SYCE2Q6PIF2 218 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 ELMSAN1Q6PJG2 1045 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 LRSAM1Q6UWE0 723 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 SCARA5Q6ZMJ2 495 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 GBP6Q6ZN66 633 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 C12orf76Q8N812 135 aaPredicted RBP12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 ZNF454Q8N9F8 522 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 ANKRD20A12PQ8NF67 263 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 BCO2Q9BYV7 579 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 NIF3L1Q9GZT8 377 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 VPS16Q9H269 839 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 HSD3B7Q9H2F3 369 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 NDST4Q9H3R1 872 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 MAN1C1Q9NR34 630 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 DZANK1Q9NVP4 752 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 TAB2Q9NYJ8 693 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 FBXW11Q9UKB1 542 aa12.87□□□□□ -0.35
SNRPD1-204ENST00000582475 CDH9Q9ULB4 789 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms