RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 PRAMEF12O95522 483 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 OR4Q2P0C623 313 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 RDXP35241 583 aaKnown RBP8.3□□□□□ -1.08
CCDC47-205ENST00000582331 GALK1P51570 392 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 DGKEP52429 567 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 IRX4P78413 519 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 GPR17Q13304 367 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 ZNF568Q3ZCX4 644 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 FBXO43Q4G163 708 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 USP39Q53GS9 565 aaKnown RBP8.3□□□□□ -1.08
CCDC47-205ENST00000582331 CENPPQ6IPU0 288 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 RUFY3Q7L099 469 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 SYT13Q7L8C5 426 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 USP37Q86T82 979 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 ITIH5Q86UX2 942 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 CATSPER3Q86XQ3 398 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 PSMG2Q969U7 264 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 EXOC4Q96A65 974 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 ACO2Q99798 780 aaKnown RBP8.3□□□□□ -1.08
CCDC47-205ENST00000582331 FAM83CQ9BQN1 747 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 TCHPQ9BT92 498 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 FBRSL1Q9HCM7 1045 aaKnown RBP8.3□□□□□ -1.08
CCDC47-205ENST00000582331 POLD4Q9HCU8 107 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 PTPRHQ9HD43 1115 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 CNTN3Q9P232 1028 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 KLK13Q9UKR3 277 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 INVSQ9Y283 1065 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 TIMM13Q9Y5L4 95 aaPredicted RBP8.3□□□□□ -1.08
CCDC47-205ENST00000582331 KIF26AQ9ULI4 1882 aaPredicted RBP8.3□□□□□ -1.08
CCDC47-205ENST00000582331 EML5Q05BV3 1969 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 TRIP11Q15643 1979 aa8.3□□□□□ -1.08
CCDC47-205ENST00000582331 PATE3B3GLJ2 98 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 M0QZQ0 153 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 NEMFO60524 1076 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 MED24O75448 989 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 MCF2P10911 925 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 KRT2P35908 639 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 CYP4F8P98187 520 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 LMAN2Q12907 356 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 NR5A1Q13285 461 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 DMC1Q14565 340 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 SOWAHCQ53LP3 525 aaPredicted RBP8.29□□□□□ -1.08
CCDC47-205ENST00000582331 PMS2CLQ68D20 193 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 CYP2U1Q7Z449 544 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 ATAD1Q8NBU5 361 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 RPLP0P6Q8NHW5 317 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 KIFAP3Q92845 792 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 GCNAQ96QF7 691 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 MTMR9Q96QG7 549 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 P2RY13Q9BPV8 354 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 ANP32EQ9BTT0 268 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 POLR3CQ9BUI4 534 aaPredicted RBP8.29□□□□□ -1.08
CCDC47-205ENST00000582331 SLC46A2Q9BY10 475 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 MRPL4Q9BYD3 311 aaKnown RBP8.29□□□□□ -1.08
CCDC47-205ENST00000582331 SMG9Q9H0W8 520 aaKnown RBP8.29□□□□□ -1.08
CCDC47-205ENST00000582331 EBF3Q9H4W6 596 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 BRMS1Q9HCU9 246 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 HPS4Q9NQG7 708 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 ZMYM5Q9UJ78 669 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 IGF2RP11717 2491 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 PKD1L2Q7Z442 2459 aa8.29□□□□□ -1.08
CCDC47-205ENST00000582331 NUP210Q8TEM1 1887 aaPredicted RBP8.28□□□□□ -1.08
CCDC47-205ENST00000582331 SPAARA0A1B0GVQ0 90 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 MTMR11A4FU01 709 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 OTOL1A6NHN0 477 aaPredicted RBP8.28□□□□□ -1.08
CCDC47-205ENST00000582331 CCDC169A6NNP5 214 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 H0Y626 953 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 SOAT2O75908 522 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 TRIM16O95361 564 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 RPA1P27694 616 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 CDC25CP30307 473 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 DHPSP49366 369 aaPredicted RBP8.28□□□□□ -1.08
CCDC47-205ENST00000582331 TUFMP49411 452 aaKnown RBP8.28□□□□□ -1.08
CCDC47-205ENST00000582331 PSMD2Q13200 908 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 MYBPC2Q14324 1141 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 VEPH1Q14D04 833 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 TAF12Q16514 161 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 TRIM68Q6AZZ1 485 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 ARMCX5Q6P1M9 558 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 CC2D1AQ6P1N0 951 aaPredicted RBP8.28□□□□□ -1.08
CCDC47-205ENST00000582331 C19orf48Q6RUI8 117 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 DSTYKQ6XUX3 929 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 PDZD3Q86UT5 571 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 PROSER1Q86XN7 944 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 CMTM8Q8IZV2 173 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 PIGKQ92643 395 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 ACDQ96AP0 544 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 CHFRQ96EP1 664 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 TARS2Q9BW92 718 aaKnown RBP8.28□□□□□ -1.08
CCDC47-205ENST00000582331 NUSAP1Q9BXS6 441 aaKnown RBP8.28□□□□□ -1.08
CCDC47-205ENST00000582331 HSFX1Q9UBD0 423 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 TUBGCP4Q9UGJ1 667 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 EVLQ9UI08 416 aaPredicted RBP8.28□□□□□ -1.08
CCDC47-205ENST00000582331 CYP46A1Q9Y6A2 500 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 ITPR1Q14643 2758 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 PHLPP2Q6ZVD8 1323 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 STK36Q9NRP7 1315 aa8.28□□□□□ -1.08
CCDC47-205ENST00000582331 FAM221BA6H8Z2 402 aa8.27□□□□□ -1.09
CCDC47-205ENST00000582331 HARSP12081 509 aaKnown RBP8.27□□□□□ -1.09
CCDC47-205ENST00000582331 ARSAP15289 507 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms