RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 CCDC192P0DO97 292 aa17.57■□□□□ 0.4
RNF43-206ENST00000582293 CPB1P15086 417 aa17.57■□□□□ 0.4
RNF43-206ENST00000582293 LHX1P48742 406 aa17.57■□□□□ 0.4
RNF43-206ENST00000582293 MRPS5P82675 430 aaKnown RBP17.57■□□□□ 0.4
RNF43-206ENST00000582293 ADCY1Q08828 1119 aa17.57■□□□□ 0.4
RNF43-206ENST00000582293 SMAD4Q13485 552 aaKnown RBP17.57■□□□□ 0.4
RNF43-206ENST00000582293 CDKAL1Q5VV42 579 aa17.57■□□□□ 0.4
RNF43-206ENST00000582293 TPGS2Q68CL5 300 aa17.57■□□□□ 0.4
RNF43-206ENST00000582293 PTCRAQ6ISU1 281 aaPredicted RBP17.57■□□□□ 0.4
RNF43-206ENST00000582293 TMC5Q6UXY8 1006 aa17.57■□□□□ 0.4
RNF43-206ENST00000582293 TCEAL8Q8IYN2 117 aa17.57■□□□□ 0.4
RNF43-206ENST00000582293 THEM5Q8N1Q8 247 aa17.57■□□□□ 0.4
RNF43-206ENST00000582293 ATAD1Q8NBU5 361 aa17.57■□□□□ 0.4
RNF43-206ENST00000582293 CMASQ8NFW8 434 aaPredicted RBP17.57■□□□□ 0.4
RNF43-206ENST00000582293 SLC7A14Q8TBB6 771 aa17.57■□□□□ 0.4
RNF43-206ENST00000582293 TATDN2Q93075 761 aa17.57■□□□□ 0.4
RNF43-206ENST00000582293 LPIN3Q9BQK8 851 aa17.57■□□□□ 0.4
RNF43-206ENST00000582293 USP15Q9Y4E8 981 aaPredicted RBP17.57■□□□□ 0.4
RNF43-206ENST00000582293 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.57■□□□□ 0.4
RNF43-206ENST00000582293 C5orf42Q9H799 3197 aa17.56■□□□□ 0.4
RNF43-206ENST00000582293 CCDC195A0A1B0GUA6 201 aa17.56■□□□□ 0.4
RNF43-206ENST00000582293 MYBPHLA2RUH7 354 aa17.56■□□□□ 0.4
RNF43-206ENST00000582293 MYL7Q01449 175 aa17.56■□□□□ 0.4
RNF43-206ENST00000582293 SMAD2Q15796 467 aaKnown RBP17.56■□□□□ 0.4
RNF43-206ENST00000582293 ANO6Q4KMQ2 910 aa17.56■□□□□ 0.4
RNF43-206ENST00000582293 SLC39A12Q504Y0 691 aa17.56■□□□□ 0.4
RNF43-206ENST00000582293 INTS6LQ5JSJ4 861 aaKnown RBP17.56■□□□□ 0.4
RNF43-206ENST00000582293 MIIPQ5JXC2 388 aa17.56■□□□□ 0.4
RNF43-206ENST00000582293 FAM171BQ6P995 826 aa17.56■□□□□ 0.4
RNF43-206ENST00000582293 GPR149Q86SP6 731 aa17.56■□□□□ 0.4
RNF43-206ENST00000582293 DPEP3Q9H4B8 488 aa17.56■□□□□ 0.4
RNF43-206ENST00000582293 CRTAC1Q9NQ79 661 aa17.56■□□□□ 0.4
RNF43-206ENST00000582293 ZDHHC7Q9NXF8 308 aa17.56■□□□□ 0.4
RNF43-206ENST00000582293 HMGXB4Q9UGU5 601 aa17.56■□□□□ 0.4
RNF43-206ENST00000582293 DENND4AQ7Z401 1863 aa17.56■□□□□ 0.4
RNF43-206ENST00000582293 AFPP02771 609 aaKnown RBP17.55■□□□□ 0.4
RNF43-206ENST00000582293 PDGFRBP09619 1106 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 HOXA9P31269 272 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 PSMC1P62191 440 aaKnown RBP17.55■□□□□ 0.4
RNF43-206ENST00000582293 ITIH3Q06033 890 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 DUSP4Q13115 394 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 SKOR2Q2VWA4 1001 aaPredicted RBP17.55■□□□□ 0.4
RNF43-206ENST00000582293 UVSSAQ2YD98 709 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 OR6B3Q8NGW1 331 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 TWNKQ96RR1 684 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 ARID3AQ99856 593 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 SYT15Q9BQS2 421 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 RHOBTB2Q9BYZ6 727 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 PRKD2Q9BZL6 878 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 NIF3L1Q9GZT8 377 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 CYP4F11Q9HBI6 524 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 FANCLQ9NW38 375 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 GTF3C4Q9UKN8 822 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 INSL5Q9Y5Q6 135 aa17.55■□□□□ 0.4
RNF43-206ENST00000582293 KCNJ18B7U540 433 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 P4HA2O15460 535 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 SOAT2O75908 522 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 GNL1P36915 607 aaPredicted RBP17.54■□□□□ 0.4
RNF43-206ENST00000582293 INCA1Q0VD86 236 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 KCNJ12Q14500 433 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 TPD52L1Q16890 204 aaPredicted RBP17.54■□□□□ 0.4
RNF43-206ENST00000582293 AAK1Q2M2I8 961 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 ZSCAN23Q3MJ62 389 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 LIN9Q5TKA1 542 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 WHAMMQ8TF30 809 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 POMKQ9H5K3 350 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 DPP7Q9UHL4 492 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 CDH9Q9ULB4 789 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 MAFFQ9ULX9 164 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 SLC27A5Q9Y2P5 690 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 YIPF1Q9Y548 306 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 NOTCH4Q99466 2003 aa17.54■□□□□ 0.4
RNF43-206ENST00000582293 CCL16O15467 120 aa17.53■□□□□ 0.4
RNF43-206ENST00000582293 POU2F2P09086 479 aa17.53■□□□□ 0.4
RNF43-206ENST00000582293 HNRNPA1P09651 372 aaKnown RBP eCLIP17.53■□□□□ 0.4
RNF43-206ENST00000582293 PCSK1P29120 753 aa17.53■□□□□ 0.4
RNF43-206ENST00000582293 MTIF2P46199 727 aaKnown RBP17.53■□□□□ 0.4
RNF43-206ENST00000582293 MYL5Q02045 173 aa17.53■□□□□ 0.4
RNF43-206ENST00000582293 ORC1Q13415 861 aa17.53■□□□□ 0.4
RNF43-206ENST00000582293 CBX2Q14781 532 aaPredicted RBP17.53■□□□□ 0.4
RNF43-206ENST00000582293 PUS10Q3MIT2 529 aaKnown RBP17.53■□□□□ 0.4
RNF43-206ENST00000582293 TCP11X2Q5H9J9 407 aa17.53■□□□□ 0.4
RNF43-206ENST00000582293 PPM1LQ5SGD2 360 aa17.53■□□□□ 0.4
RNF43-206ENST00000582293 CCDC149Q6ZUS6 474 aa17.53■□□□□ 0.4
RNF43-206ENST00000582293 CREBRFQ8IUR6 639 aa17.53■□□□□ 0.4
RNF43-206ENST00000582293 DHX40Q8IX18 779 aaKnown RBP17.53■□□□□ 0.4
RNF43-206ENST00000582293 DCP1BQ8IZD4 617 aaKnown RBP17.53■□□□□ 0.4
RNF43-206ENST00000582293 AOPEPQ8N6M6 819 aa17.53■□□□□ 0.4
RNF43-206ENST00000582293 UBR7Q8N806 425 aa17.53■□□□□ 0.4
RNF43-206ENST00000582293 BPIFA3Q9BQP9 254 aa17.53■□□□□ 0.4
RNF43-206ENST00000582293 SNX25Q9H3E2 840 aa17.53■□□□□ 0.4
RNF43-206ENST00000582293 CEP72Q9P209 647 aa17.53■□□□□ 0.4
RNF43-206ENST00000582293 TCF20Q9UGU0 1960 aaKnown RBP17.53■□□□□ 0.4
RNF43-206ENST00000582293 PTPRDP23468 1912 aa17.53■□□□□ 0.4
RNF43-206ENST00000582293 A8MXQ7 604 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 NRG2O14511 850 aaPredicted RBP17.52■□□□□ 0.4
RNF43-206ENST00000582293 PRRG1O14668 218 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 N4BP1O75113 896 aaKnown RBP17.52■□□□□ 0.4
RNF43-206ENST00000582293 LETM1O95202 739 aaPredicted RBP17.52■□□□□ 0.4
RNF43-206ENST00000582293 HAPLN1P10915 354 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms